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DNA-binding properties of ARID family proteins
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title
DNA-binding properties of ARID family proteins
(English)
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main subject
AT-rich interaction domain 4A
1 reference
stated in
GOA release 2020-03-11
AT-rich interaction domain 5B
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stated in
GOA release 2020-03-11
AT-rich interaction domain 5A
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stated in
GOA release 2020-03-11
Lysine demethylase 5B
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stated in
GOA release 2020-03-11
Lysine demethylase 5A
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stated in
GOA release 2020-03-11
DNA binding
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stated in
GOA release 2020-03-11
author name string
Antonia Patsialou
series ordinal
1
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Deborah Wilsker
series ordinal
2
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Elizabeth Moran
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3
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language of work or name
English
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publication date
2005
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published in
Nucleic Acids Research
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volume
33
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issue
1
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page(s)
66-80
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cites work
Two related ARID family proteins are alternative subunits of human SWI/SNF complexes
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PubMed Central
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24 March 2017
Differential targeting of two distinct SWI/SNF-related Drosophila chromatin-remodeling complexes
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PubMed Central
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24 March 2017
The DNA-binding properties of the ARID-containing subunits of yeast and mammalian SWI/SNF complexes
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24 March 2017
The Pfam protein families database
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PubMed Central
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24 March 2017
Identification and characterization of three new components of the mSin3A corepressor complex
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24 March 2017
Novel SWI/SNF chromatin-remodeling complexes contain a mixed-lineage leukemia chromosomal translocation partner
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PubMed Central
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24 March 2017
Human PLU-1 Has transcriptional repression properties and interacts with the developmental transcription factors BF-1 and PAX9
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24 March 2017
Largest subunits of the human SWI/SNF chromatin-remodeling complex promote transcriptional activation by steroid hormone receptors
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PubMed Central
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24 March 2017
Cloning and characterization of hELD/OSA1, a novel BRG1 interacting protein
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PubMed Central
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24 March 2017
Retinoblastoma-binding protein 2 (Rbp2) potentiates nuclear hormone receptor-mediated transcription
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PubMed Central
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24 March 2017
RBP1 recruits the mSIN3-histone deacetylase complex to the pocket of retinoblastoma tumor suppressor family proteins found in limited discrete regions of the nucleus at growth arrest
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PubMed Central
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24 March 2017
Expression of SMARCF1, a truncated form of SWI1, in neuroblastoma
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PubMed Central
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24 March 2017
A specificity and targeting subunit of a human SWI/SNF family-related chromatin-remodeling complex
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PubMed Central
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24 March 2017
The human SWI-SNF complex protein p270 is an ARID family member with non-sequence-specific DNA binding activity
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Solution structure of the DNA binding domain from Dead ringer, a sequence-specific AT-rich interaction domain (ARID)
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PubMed Central
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24 March 2017
RBP1 recruits both histone deacetylase-dependent and -independent repression activities to retinoblastoma family proteins
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PubMed Central
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24 March 2017
Bdp, a new member of a family of DNA-binding proteins, associates with the retinoblastoma gene product
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PubMed Central
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24 March 2017
A novel gene (PLU-1) containing highly conserved putative DNA/chromatin binding motifs is specifically up-regulated in breast cancer
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PubMed Central
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24 March 2017
The novel Mrf-2 DNA-binding domain recognizes a five-base core sequence through major and minor-groove contacts
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
p300/CREB binding protein-related protein p270 is a component of mammalian SWI/SNF complexes
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Repression by a differentiation-specific factor of the human cytomegalovirus enhancer
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PubMed Central
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24 March 2017
RFX proteins, a novel family of DNA binding proteins conserved in the eukaryotic kingdom
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Characterization of the retinoblastoma binding proteins RBP1 and RBP2
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Structure and DNA-binding sites of the SWI1 AT-rich interaction domain (ARID) suggest determinants for sequence-specific DNA recognition
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
The structure of the Dead ringer-DNA complex reveals how AT-rich interaction domains (ARIDs) recognize DNA.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
1H, 13C and 15N resonance assignments and secondary structure of ADR6 DNA-binding domain
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Targeting Activity Is Required for SWI/SNF Function In Vivo and Is Accomplished through Two Partially Redundant Activator-Interaction Domains
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Mutations in the DNA-binding domain of the transcription factor Bright act as dominant negative proteins and interfere with immunoglobulin transactivation
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PubMed Central
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24 March 2017
Neonatal mortality and leanness in mice lacking the ARID transcription factor Mrf-2
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
JUMONJI, a critical factor for cardiac development, functions as a transcriptional repressor
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Gene targeting of Desrt, a novel ARID class DNA-binding protein, causes growth retardation and abnormal development of reproductive organs
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Dynamics of the Mrf-2 DNA-binding domain free and in complex with DNA
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PubMed Central
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24 March 2017
Characterization of mammalian orthologues of the Drosophila osa gene: cDNA cloning, expression, chromosomal localization, and direct physical interaction with Brahma chromatin-remodeling complex
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PubMed Central
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24 March 2017
HMG1 and 2, and related 'architectural' DNA-binding proteins
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Jumonji, a nuclear protein that is necessary for normal heart development
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PubMed Central
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24 March 2017
Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro
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PubMed Central
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24 March 2017
A novel DNA-binding motif shares structural homology to DNA replication and repair nucleases and polymerases
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PubMed Central
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24 March 2017
The immunoglobulin heavy-chain matrix-associating regions are bound by Bright: a B cell-specific trans-activator that describes a new DNA-binding protein family
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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24 March 2017
Mutagenesis Study on the Zebra Fish SOX9 High-Mobility Group: Comparison of Sequence and Non-Sequence Specific HMG Domains
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PubMed Central
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27 September 2017
Control of neuronal subtype identity by the C. elegans ARID protein CFI-1.
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PubMed Central
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27 September 2017
ARID proteins: a diverse family of DNA binding proteins implicated in the control of cell growth, differentiation, and development.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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27 September 2017
RBP1L1, a retinoblastoma-binding protein-related gene encoding an antigenic epitope abundantly expressed in human carcinomas and normal testis
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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27 September 2017
Transcriptional activation by a matrix associating region-binding protein. contextual requirements for the function of bright
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PubMed Central
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27 September 2017
ARID proteins come in from the desert
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PubMed Central
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27 September 2017
Nonsequence-specific DNA recognition: a structural perspective
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PubMed Central
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27 September 2017
Osa associates with the Brahma chromatin remodeling complex and promotes the activation of some target genes
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=546134
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27 September 2017
RBP1 induces growth arrest by repression of E2F-dependent transcription
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PubMed Central
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27 September 2017
Characterization of monoclonal antibodies raised against p300: both p300 and CBP are present in intracellular TBP complexes
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27 September 2017
Characterization of the dead ringer gene identifies a novel, highly conserved family of sequence-specific DNA-binding proteins
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PubMed Central
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27 September 2017
A novel X gene with a widely transcribed Y-linked homologue escapes X-inactivation in mouse and human.
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27 September 2017
Gene trap capture of a novel mouse gene, jumonji, required for neural tube formation
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27 September 2017
A mouse Y chromosome gene encoded by a region essential for spermatogenesis and expression of male-specific minor histocompatibility antigens.
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27 September 2017
Role of tryptophan repeats and flanking amino acids in Myb-DNA interactions
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27 September 2017
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30 May 2018
Expression of p270(ARID1A), a component of human SWI/SNF complexes, in human tumors
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28 November 2018
The Drosophila retained/dead ringer gene and ARID gene family function during development.
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28 November 2018
Aromatic amino acids are critical for stability of the bicoid homeodomain
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PubMed Central
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28 November 2018
Evidence of domain swapping within the jumonji family of transcription factors
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PubMed
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based on heuristic
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JmjC: cupin metalloenzyme-like domains in jumonji, hairless and phospholipase A2β
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PubMed
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inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/GKI145
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
419893
OpenCitations bibliographic resource ID
419893
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
419893
PMCID
546134
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
419893
PubMed ID
15640446
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
419893
ResearchGate publication ID
8091787
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