(Q30484002)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

title

InnateDB: facilitating systems-level analyses of the mammalian innate immune response (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Geoffrey Winsor

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Matthew R Laird

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Dan Tulpan

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Karsten Hokamp

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Fiona Brinkman

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

22

Robert E W Hancock

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

20

Tamara Munzner

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

7

Jennifer L Gardy

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

author name string

Calvin Chan

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Nicolas Richard

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Aaron Barsky

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Fiona M Roche

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Timothy H W Chan

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Naisha Shah

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Raymond Lo

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Misbah Naseer

12

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Jaimmie Que

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Melissa Yau

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Michael Acab

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Matthew D Whiteside

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Avinash Chikatamarla

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

Bernadette Mah

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

publication date

2 September 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

Molecular Systems Biology

13 January 2020

published in

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

volume

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

page(s)

218

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

describes a project that uses

13 January 2020

Cytoscape

1 reference

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

SQL

1 reference

26 June 2022

https://europepmc.org/article/PMC/PMC2564732

inferred from PubMed Central ID database lookup

cites work

Hubba: hub objects analyzer--a framework of interactome hubs identification for network biology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The Innate Immune Database (IIDB)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Interaction networks for systems biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

KEGG for linking genomes to life and the environment

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The universal protein resource (UniProt)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The BioGRID Interaction Database: 2008 update

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The HGNC Database in 2008: a resource for the human genome

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

STAT proteins in innate immunity during sepsis: lessons from gene knockout mice

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Intracellular NOD-like receptors in host defense and disease

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

20 June 2018

The science of adjuvants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Construction of an open-access database that integrates cross-reference information from the transcriptome and proteome of immune cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The minimum information required for reporting a molecular interaction experiment (MIMIx).

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Negative regulation of toll-like receptor signaling by NF-kappaB p50 ubiquitination blockade

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Toll-like receptors, RIG-I-like RNA helicases and the antiviral innate immune response

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The negative regulation of Toll-like receptor and associated pathways

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

PathExpress: a web-based tool to identify relevant pathways in gene expression data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Distinct endocytic mechanisms of CD22 (Siglec-2) and Siglec-F reflect roles in cell signaling and innate immunity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Immunome: a reference set of genes and proteins for systems biology of the human immune system.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Systems biology of innate immunity

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Signaling pathways downstream of pattern-recognition receptors and their cross talk

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Cerebral: a Cytoscape plugin for layout of and interaction with biological networks using subcellular localization annotation.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

IntAct--open source resource for molecular interaction data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

MINT: the Molecular INTeraction database

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

A comprehensive map of the toll-like receptor signaling network

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Improving the specificity of high-throughput ortholog prediction

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Systems biology approaches identify ATF3 as a negative regulator of Toll-like receptor 4.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Modulation of the TLR-mediated inflammatory response by the endogenous human host defense peptide LL-37.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

How does gene expression clustering work?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

A network-based analysis of systemic inflammation in humans

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Implication of Toll-like receptor and tumor necrosis factor alpha signaling in septic shock

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

oPOSSUM: identification of over-represented transcription factor binding sites in co-expressed genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Neutrophil beta2 integrins: moderators of life or death decisions

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Dissecting innate immune responses with the tools of systems biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Reactome: a knowledgebase of biological pathways

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The Biomolecular Interaction Network Database and related tools 2005 update

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Pseudomonas aeruginosa Genome Database and PseudoCAP: facilitating community-based, continually updated, genome annotation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

ArrayPipe: a flexible processing pipeline for microarray data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

FatiGO: a web tool for finding significant associations of Gene Ontology terms with groups of genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

A physical and functional map of the human TNF-alpha/NF-kappa B signal transduction pathway

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The Database of Interacting Proteins: 2004 update

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Cytoscape: a software environment for integrated models of biomolecular interaction networks

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The NOD: a signaling module that regulates apoptosis and host defense against pathogens

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Epidemiology of severe sepsis in the United States: analysis of incidence, outcome, and associated costs of care

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Gene ontology: tool for the unification of biology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The Mouse Genome Database (MGD): genetic and genomic information about the laboratory mouse. The Mouse Genome Database Group.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Cross-talk between transcription factors NF-kappa B and C/EBP in the transcriptional regulation of genes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

IRF-3-dependent and augmented target genes during viral infection.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

Co-operative functions between nuclear factors NFkappaB and CCAT/enhancer-binding protein-beta (C/EBP-beta) regulate the IL-6 promoter in autocrine human prostate cancer cells

26 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2564732

The chemokine CCL6 promotes innate immunity via immune cell activation and recruitment

26 November 2018

1 reference

12 December 2020

Sequencing solution: use volunteer annotators organized via Internet

1 reference

12 December 2020

IRIS: a database surveying known human immune system genes

1 reference

12 December 2020

T cell activation by TLRs: a role for TLRs in the adaptive immune response

1 reference

12 December 2020

Controlling the False Discovery Rate: A Practical and Powerful Approach to Multiple Testing

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FMSB.2008.55

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1038/MSB.2008.55

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18766178%20AND%20SRC:MED&resulttype=core&format=json

13 January 2020

1 reference