(Q52080409)

21 April 2018

title

The performance of several multiple-sequence alignment programs in relation to secondary-structure features for an rRNA sequence. (English)

1 reference

21 April 2018

1 reference

R E Hickson

1

1 reference

21 April 2018

C Simon

series ordinal

2

1 reference

21 April 2018

S W Perrey

series ordinal

3

1 reference

21 April 2018

publication date

1 April 2000

1 reference

21 April 2018

Molecular Biology and Evolution

published in

1 reference

21 April 2018

volume

17

1 reference

21 April 2018

issue

4

1 reference

21 April 2018

page(s)

530-539

1 reference

21 April 2018

A strategy for the rapid multiple alignment of protein sequences. Confidence levels from tertiary structure comparisons

cites work

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Mix'n'Match: an improved multiple sequence alignment procedure for distantly related proteins using secondary structure predictions, designed to be independent of the choice of gap penalty and scoring matrix.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Database on the structure of large subunit ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Progressive sequence alignment as a prerequisite to correct phylogenetic trees

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Alignment-ambiguous nucleotide sites and the exclusion of systematic data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Collection of small subunit (16S- and 16S-like) ribosomal RNA structures: 1994

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Unified approach to alignment and phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Conserved sequence motifs, alignment, and secondary structure for the third domain of animal 12S rRNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

SplitsTree: analyzing and visualizing evolutionary data

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Use of rRNA secondary structure in phylogenetic studies to identify homologous positions: an example of alignment and data presentation from the frogs

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

A tool for multiple sequence alignment

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Effects of nucleotide sequence alignment on phylogeny estimation: a case study of 18S rDNAs of apicomplexa

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

A general method applicable to the search for similarities in the amino acid sequence of two proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Molecular homology assessment and phylogeny in the lizard family opluridae (Squamata: Iguania).

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

A general method for fast multiple sequence alignment.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Reconstructing evolution from eukaryotic small-ribosomal-subunit RNA sequences: calibration of the molecular clock.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Database on the structure of small subunit ribosomal RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

Elision: a method for accommodating multiple molecular sequence alignments with alignment-ambiguous sites

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FOXFORDJOURNALS.MOLBEV.A026333

10.1093/OXFORDJOURNALS.MOLBEV.A026333

21 January 2018

Identifiers

DOI

1 reference

21 April 2018

PubMed ID

10742045

1 reference

21 April 2018