(Q64065868)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

title

A 16S rDNA PCR-based theoretical to actual delta approach on culturable mock communities revealed severe losses of diversity information (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

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Ronaldo Costa Argôlo-Filho

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

Leandro Lopes Loguercio

4

object named as

Leandro Lopes Loguercio

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

author name string

Hellen Ribeiro Martins Dos Santos

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

Caio Suzart Argolo

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

language of work or name

English

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publication date

8 April 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

volume

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

issue

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

page(s)

74

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

Creative Commons Attribution 4.0 International

2 May 2020

copyright license

start time

8 April 2019

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

exact match

https://scigraph.springernature.com/pub.10.1186/s12866-019-1446-2

0 references

cites work

Applications of the polymerase chain reaction in environmental microbiology

1 reference

12 December 2020

Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia

1 reference

12 December 2020

Phylogenetic identification and in situ detection of individual microbial cells without cultivation

1 reference

12 December 2020

A procedure for mapping Arabidopsis mutations using co-dominant ecotype-specific PCR-based markers

1 reference

12 December 2020

Identification of Mycobacterium species by using amplified ribosomal DNA restriction analysis.

1 reference

12 December 2020

Analysis of actinomycete communities by specific amplification of genes encoding 16S rRNA and gel-electrophoretic separation in denaturing gradients

1 reference

12 December 2020

Characterization of microbial diversity by determining terminal restriction fragment length polymorphisms of genes encoding 16S rRNA.

1 reference

12 December 2020

Determination of microbial diversity in environmental samples: pitfalls of PCR-based rRNA analysis

1 reference

12 December 2020

Application of denaturing gradient gel electrophoresis (DGGE) and temperature gradient gel electrophoresis (TGGE) in microbial ecology.

1 reference

12 December 2020

Impact of culture-independent studies on the emerging phylogenetic view of bacterial diversity.

1 reference

12 December 2020

Bias in template-to-product ratios in multitemplate PCR

1 reference

12 December 2020

DGGE/TGGE a method for identifying genes from natural ecosystems.

1 reference

12 December 2020

Automated approach for ribosomal intergenic spacer analysis of microbial diversity and its application to freshwater bacterial communities.

1 reference

12 December 2020

Biodiversity hotspots for conservation priorities

1 reference

12 December 2020

Assessment of microbial community structure changes by amplified ribosomal DNA restriction analysis (ARDRA).

1 reference

12 December 2020

The Diversity of Archaea and Bacteria in Association with the Roots of Zea mays L.

1 reference

12 December 2020

Review and re-analysis of domain-specific 16S primers

1 reference

12 December 2020

The soil metagenome--a rich resource for the discovery of novel natural products

1 reference

12 December 2020

Methods of studying soil microbial diversity

1 reference

12 December 2020

Life history implications of rRNA gene copy number in Escherichia coli

1 reference

12 December 2020

Genomics at the genus scale

1 reference

12 December 2020

Changes in chloroplast DNA during development in tobacco, Medicago truncatula, pea, and maize

1 reference

12 December 2020

Microbial diversity in the deep sea and the underexplored "rare biosphere"

1 reference

12 December 2020

Phylogenetic analyses of cyanobacterial genomes: quantification of horizontal gene transfer events

1 reference

12 December 2020

Comparison of DNA extraction methods for analysis of turkey cecal microbiota

1 reference

12 December 2020

Genotypic microbial community profiling: a critical technical review

1 reference

12 December 2020

Endophytic bacterial diversity in rice (Oryza sativa L.) roots estimated by 16S rDNA sequence analysis

1 reference

12 December 2020

Ultrastructural detection of an unusual intranuclear bacterium in Pentastiridius leporinus (Hemiptera: Cixiidae).

1 reference

12 December 2020

How to get more out of molecular fingerprints: practical tools for microbial ecology

1 reference

12 December 2020

A multiple-method approach reveals a declining amount of chloroplast DNA during development in Arabidopsis

1 reference

12 December 2020

Influence of Arabidopsis thaliana accessions on rhizobacterial communities and natural variation in root exudates

1 reference

12 December 2020

Microbial community profiling for human microbiome projects: Tools, techniques, and challenges

1 reference

12 December 2020

Polymerase chain reaction primers miss half of rRNA microbial diversity

1 reference

12 December 2020

Evaluating amplified rDNA restriction analysis assay for identification of bacterial communities.

1 reference

12 December 2020

Experimental factors affecting PCR-based estimates of microbial species richness and evenness.

1 reference

12 December 2020

Microbial phylogeny and diversity: small subunit ribosomal RNA sequence analysis and beyond.

1 reference

12 December 2020

Intragenomic and intraspecific heterogeneity in rrs may surpass interspecific variability in a natural population of Veillonella

1 reference

12 December 2020

Diversity of 16S rRNA genes within individual prokaryotic genomes.

1 reference

12 December 2020

Endophytic bacterial diversity in roots of Phragmites australis in constructed Beijing Cuihu Wetland (China).

1 reference

12 December 2020

Endophytic fungal diversity in Theobroma cacao (cacao) and T. grandiflorum (cupuaçu) trees and their potential for growth promotion and biocontrol of black-pod disease

1 reference

12 December 2020

Reproducibility and quantitation of amplicon sequencing-based detection

1 reference

12 December 2020

Isolation and analysis of high quality nuclear DNA with reduced organellar DNA for plant genome sequencing and resequencing

1 reference

12 December 2020

Barcoded primers used in multiplex amplicon pyrosequencing bias amplification

1 reference

12 December 2020

Phyllosphere bacterial communities of trichome-bearing and trichomeless Arabidopsis thaliana leaves

1 reference

12 December 2020

Molecular and culture-dependent analyses revealed similarities in the endophytic bacterial community composition of leaves from three rice (Oryza sativa) varieties

1 reference

12 December 2020

Ultra-high-throughput microbial community analysis on the Illumina HiSeq and MiSeq platforms

1 reference

12 December 2020

High-throughput sequencing of 16S rRNA gene amplicons: effects of extraction procedure, primer length and annealing temperature

1 reference

12 December 2020

PCR biases distort bacterial and archaeal community structure in pyrosequencing datasets

1 reference

12 December 2020

16S rDNA-based metagenomic analysis of bacterial diversity associated with two populations of the kleptoplastic sea slug Elysia chlorotica and its algal prey Vaucheria litorea

1 reference

12 December 2020

Effects of PCR cycle number and DNA polymerase type on the 16S rRNA gene pyrosequencing analysis of bacterial communities.

1 reference

12 December 2020

Bacterial communities associated with the leaves and the roots of Arabidopsis thaliana.

1 reference

12 December 2020

Changes of soil bacterial diversity as a consequence of agricultural land use in a semi-arid ecosystem

1 reference

12 December 2020

Revisiting bacterial phylogeny: Natural and experimental evidence for horizontal gene transfer of 16S rRNA

1 reference

12 December 2020

Intragenomic heterogeneity of 16S rRNA genes causes overestimation of prokaryotic diversity

1 reference

12 December 2020

New insights into the structure and function of phyllosphere microbiota through high-throughput molecular approaches

1 reference

12 December 2020

Minimization of chloroplast contamination in 16S rRNA gene pyrosequencing of insect herbivore bacterial communities

1 reference

12 December 2020

The effect of primer choice and short read sequences on the outcome of 16S rRNA gene based diversity studies

1 reference

12 December 2020

Principles and applications of polymerase chain reaction in medical diagnostic fields: a review

1 reference

12 December 2020

Isolation and characterization of endophytic bacteria isolated from the leaves of the common bean (Phaseolus vulgaris).

1 reference

12 December 2020

The choice of PCR primers has great impact on assessments of bacterial community diversity and dynamics in a wastewater treatment plant

1 reference

12 December 2020

Endophytic bacteria in plant tissue culture: differences between easy- and difficult-to-propagate Prunus avium genotypes

1 reference

12 December 2020

Evaluating bias of illumina-based bacterial 16S rRNA gene profiles

1 reference

12 December 2020

Spatial Heterogeneity of Bacteria: Evidence from Hot Composts by Culture-independent Analysis

1 reference

12 December 2020

Methodological approaches for studying the microbial ecology of drinking water distribution systems

1 reference

12 December 2020

Selection on soil microbiomes reveals reproducible impacts on plant function

1 reference

12 December 2020

Evaluation of automated ribosomal intergenic spacer analysis for bacterial fingerprinting of rumen microbiome compared to pyrosequencing technology

1 reference

12 December 2020

Structure, variation, and assembly of the root-associated microbiomes of rice

1 reference

12 December 2020

The truth about metagenomics: quantifying and counteracting bias in 16S rRNA studies

1 reference

12 December 2020

Genomic insights into the taxonomic status of the Bacillus cereus group

1 reference

12 December 2020

Bacillus thuringiensis Is an Environmental Pathogen and Host-Specificity Has Developed as an Adaptation to Human-Generated Ecological Niches

1 reference

12 December 2020

SELECTIVE ELIMINATION OF CHLOROPLASTIDIAL DNA FOR METAGENOMICS OF BACTERIA ASSOCIATED WITH THE GREEN ALGA CAULERPA TAXIFOLIA (BRYOPSIDOPHYCEAE)(1).

1 reference

12 December 2020

Performance of 16s rDNA Primer Pairs in the Study of Rhizosphere and Endosphere Bacterial Microbiomes in Metabarcoding Studies

1 reference

12 December 2020

16S rRNA gene sequencing of mock microbial populations- impact of DNA extraction method, primer choice and sequencing platform

1 reference

12 December 2020

Next generation sequencing data of a defined microbial mock community

1 reference

12 December 2020

Effect of organic matter enrichment on the fungal community in limestone cave sediments.

1 reference

12 December 2020

Modern molecular approaches for analyzing microbial diversity from mushroom compost ecosystem.

1 reference

12 December 2020

10.1186/S12866-019-1446-2

Identifiers

DOI

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

2 May 2020

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s12866-019-1446-2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:30961521%20AND%20SRC:MED&resulttype=core&format=json

2 May 2020

1 reference