(Q21091008)

English

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology

scientific article

Prospective Genomic Characterization of the German Enterohemorrhagic Escherichia coli O104:H4 Outbreak by Rapid Next Generation Sequencing Technology

In more languages

Statements

scholarly article

0 references

Prospective genomic characterization of the German enterohemorrhagic Escherichia coli O104:H4 outbreak by rapid next generation sequencing technology (English)

0 references

Escherichia coli

0 references

20

object named as

Helge Karch

author given names

Helge

author last names

Karch

1 reference

9 August 2022

Alexander Mellmann

object named as

Alexander Mellmann

1

author given names

Alexander

author last names

Mellmann

1 reference

9 August 2022

Martina Bielaszewska

14

author given names

Martina

author last names

Bielaszewska

object named as

Martina Bielaszewska

1 reference

9 August 2022

Shana R Leopold

5

author given names

Shana R

author last names

Leopold

object named as

Shana R Leopold

1 reference

9 August 2022

10

author given names

Wenlan

author last names

Zhang

object named as

Wenlan Zhang

1 reference

9 August 2022

15

author given names

Rita

author last names

Prager

object named as

Rita Prager

1 reference

9 August 2022

2

author given names

Dag

author last names

Harmsen

object named as

Dag Harmsen

1 reference

9 August 2022

author name string

Craig A Cummings

3

author given names

Craig A

author last names

Cummings

1 reference

9 August 2022

Emily B Zentz

4

author given names

Emily B

author last names

Zentz

1 reference

9 August 2022

Alain Rico

6

author given names

Alain

author last names

Rico

1 reference

9 August 2022

Karola Prior

7

author given names

Karola

author last names

Prior

1 reference

9 August 2022

Rafael Szczepanowski

8

author given names

Rafael

author last names

Szczepanowski

1 reference

9 August 2022

Yongmei Ji

9

author given names

Yongmei

author last names

Ji

1 reference

9 August 2022

Stephen F McLaughlin

11

author given names

Stephen F

author last names

McLaughlin

1 reference

9 August 2022

John K Henkhaus

12

author given names

John K

author last names

Henkhaus

1 reference

9 August 2022

Benjamin Leopold

13

author given names

Benjamin

author last names

Leopold

1 reference

9 August 2022

Pius M Brzoska

16

author given names

Pius M

author last names

Brzoska

1 reference

9 August 2022

Richard L Moore

17

author given names

Richard L

author last names

Moore

1 reference

9 August 2022

Simone Guenther

18

author given names

Simone

author last names

Guenther

1 reference

9 August 2022

Jonathan M Rothberg

19

author given names

Jonathan M

author last names

Rothberg

1 reference

9 August 2022

language of work or name

0 references

publication date

2011

0 references

0 references

6

0 references

7

0 references

e22751

0 references

copyright license

Creative Commons Attribution 4.0 International

20 July 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

describes a project that uses

object named as

MIRA

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

Genome sequence analyses of two isolates from the recent Escherichia coli outbreak in Germany reveal the emergence of a new pathotype: Entero-Aggregative-Haemorrhagic Escherichia coli (EAHEC)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

Organised genome dynamics in the Escherichia coli species results in highly diverse adaptive paths

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

A case of hemolytic uremic syndrome caused by Escherichia coli O104:H4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

The Sequence Alignment/Map format and SAMtools

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

CAP3: A DNA sequence assembly program

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

Complete nucleotide sequence of CTX-M-15-plasmids from clinical Escherichia coli isolates: insertional events of transposons and insertion sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

Sex and virulence in Escherichia coli: an evolutionary perspective

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

19 March 2017

An integrated semiconductor device enabling non-optical genome sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

7 April 2017

Using the miraEST assembler for reliable and automated mRNA transcript assembly and SNP detection in sequenced ESTs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

7 April 2017

Characterisation of the Escherichia coli strain associated with an outbreak of haemolytic uraemic syndrome in Germany, 2011: a microbiological study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Epidemic profile of Shiga-toxin-producing Escherichia coli O104:H4 outbreak in Germany

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Update on the ongoing outbreak of haemolytic uraemic syndrome due to Shiga toxin-producing Escherichia coli (STEC) serotype O104, Germany, May 2011.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Chromosomal instability in enterohaemorrhagic Escherichia coli O157:H7: impact on adherence, tellurite resistance and colony phenotype

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

BIGSdb: Scalable analysis of bacterial genome variation at the population level.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Use of optical mapping to sort uropathogenic Escherichia coli strains into distinct subgroups

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Intrahost genome alterations in enterohemorrhagic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Analysis of collection of hemolytic uremic syndrome-associated enterohemorrhagic Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Recycling of Shiga toxin 2 genes in sorbitol-fermenting enterohemorrhagic Escherichia coli O157:NM

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Shiga toxin-mediated hemolytic uremic syndrome: time to change the diagnostic paradigm?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Sequence-based typing of genetic targets encoded outside of the O-antigen gene cluster is indicative of Shiga toxin-producing Escherichia coli serogroup lineages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Spatiotemporal analysis of invasive meningococcal disease, Germany

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Structural and functional differences between disease-associated genes of enterohaemorrhagic Escherichia coli O111.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

An IncI1 plasmid contributes to the adherence of the atypical enteroaggregative Escherichia coli strain C1096 to cultured cells and abiotic surfaces

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Enterohaemorrhagic Escherichia coli in human medicine

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Shiga-toxin-producing Escherichia coli and haemolytic uraemic syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Escherichia coli acid resistance: tales of an amateur acidophile

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Iha: a novel Escherichia coli O157:H7 adherence-conferring molecule encoded on a recently acquired chromosomal island of conserved structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Non-O157:H7 Stx2-producing Escherichia coli strains associated with sporadic cases of hemolytic-uremic syndrome in adults.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Enteroaggregative, Shiga toxin-producing Escherichia coli O111:H2 associated with an outbreak of hemolytic-uremic syndrome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Acid resistance in enteric bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Rapid procedure for detection and isolation of large and small plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

12 September 2017

Distinct binding properties of eaeA-negative verocytotoxin-producing Escherichia coli of serotype O113:H21.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

27 September 2017

Complete genome sequence of enterohemorrhagic Escherichia coli O157:H7 and genomic comparison with a laboratory strain K-12.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3140518

30 May 2018

Identification of a salmonellosis outbreak by means of molecular sequencing.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0022751

21 January 2018

Optical mapping and 454 sequencing of Escherichia coli O157 : H7 isolates linked to the US 2006 spinach-associated outbreak.

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0022751

21 January 2018

The Supramap project: linking pathogen genomes with geography to fight emergent infectious diseases

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0022751

7 January 2021

based on heuristic

inferred from DOI database lookup

Identifiers

10.1371/JOURNAL.PONE.0022751

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

2011PLoSO...622751M

0 references

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q21091008&oldid=1947612746"