(Q34346565)

1 August 2017

Modular, rule-based modeling for the design of eukaryotic synthetic gene circuits (English)

1 reference

1 August 2017

Mario Andrea Marchisio

1

1 reference

1 August 2017

Moreno Colaiacovo

2

1 reference

1 August 2017

Ellis Whitehead

3

1 reference

1 August 2017

Jörg Stelling

4

1 reference

1 August 2017

27 May 2013

1 reference

1 August 2017

1 reference

1 August 2017

7

1 reference

1 August 2017

42

1 reference

https://scigraph.springernature.com/pub.10.1186/1752-0509-7-42

1 August 2017

0 references

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Biomolecular computing systems: principles, progress and potential

6 July 2018

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Synthetic biology with RNA: progress report

6 July 2018

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Foundations for the design and implementation of synthetic genetic circuits

6 July 2018

1 reference

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6 July 2018

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6 July 2018

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6 July 2018

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Synthetic RNA switches as a tool for temporal and spatial control over gene expression

6 July 2018

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6 July 2018

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6 July 2018

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Developer's and user's guide to Clotho v2.0 A software platform for the creation of synthetic biological systems

6 July 2018

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Eugene--a domain specific language for specifying and constraining synthetic biological parts, devices, and systems

6 July 2018

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Automatic design of digital synthetic gene circuits

6 July 2018

1 reference

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6 July 2018

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Modeling RNA interference in mammalian cells

6 July 2018

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Riboswitches and the RNA world

6 July 2018

1 reference

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Standard virtual biological parts: a repository of modular modeling components for synthetic biology

6 July 2018

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Eukaryotic systems broaden the scope of synthetic biology

6 July 2018

1 reference

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TinkerCell: modular CAD tool for synthetic biology

6 July 2018

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Automated design of synthetic ribosome binding sites to control protein expression

6 July 2018

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6 July 2018

RNAi in budding yeast

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A fast and efficient translational control system for conditional expression of yeast genes

6 July 2018

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Antimony: a modular model definition language

6 July 2018

1 reference

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6 July 2018

Writing DNA with GenoCAD

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Towards programming languages for genetic engineering of living cells

6 July 2018

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Measuring the activity of BioBrick promoters using an in vivo reference standard

6 July 2018

1 reference

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6 July 2018

1 reference

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Refinement and standardization of synthetic biological parts and devices

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

A syntactic model to design and verify synthetic genetic constructs derived from standard biological parts

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

A universal RNAi-based logic evaluator that operates in mammalian cells

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

COPASI--a COmplex PAthway SImulator

6 July 2018

1 reference

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Foundations for engineering biology

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

A glycine-dependent riboswitch that uses cooperative binding to control gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

BioNetGen: software for rule-based modeling of signal transduction based on the interactions of molecular domains

6 July 2018

1 reference

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Modular modeling of cellular systems with ProMoT/Diva

6 July 2018

1 reference

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The systems biology markup language (SBML): a medium for representation and exchange of biochemical network models

6 July 2018

1 reference

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Cooperative binding of effectors by an allosteric ribozyme

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

DNA binding is not sufficient for nuclear localization of regulatory proteins in Saccharomyces cerevisiae

6 July 2018

1 reference

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Computational design of synthetic gene circuits with composable parts

6 July 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-42

Rational design and tuning of ribozyme-based devices

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-42

SynBioSS: the synthetic biology modeling suite

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-42

iBioSim: a tool for the analysis and design of genetic circuits.

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2F1752-0509-7-42

Asmparts: assembly of biological model parts.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3680069

Essential information for synthetic DNA sequences

27 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23705868

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

TPS1 terminator increases mRNA and protein yield in a Saccharomyces cerevisiae expression system

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23705868

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1752-0509-7-42

1 reference

journals/bmcsb/MarchisioCWS13

1 August 2017

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

1 August 2017

1 reference