(Q22122464)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

title

Sequencing of Aspergillus nidulans and comparative analysis with A. fumigatus and A. oryzae (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

Conserved upstream open reading frame (uORF) of AN4984

14 January 2020

main subject

Aspergillus fumigatus

0 references

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Putative cyclin-dependent protein kinase

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Conserved upstream open reading frame (uORF) of AN4864/alg6

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Putative glucosyltransferase

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Subunit of the SAGA transcriptional regulatory complex

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Conserved upstream open reading frame (uORF) of AN4670

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Putative condensin subunit, ortholog S. cerevisiae Smc4p

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Conserved upstream open reading frame (uORF) of AN4597

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Conserved upstream open reading frame (uORF) of AN4486/leuB

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Putative transcriptional activator with a predicted role in leucine biosynthesis

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Putative 18S rRNA processing complex subunit

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Conserved upstream open reading frame (uORF) of AN4460

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Putative 1,3-beta-glucan synthase with a predicted role in glucan biosynthesis

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Nitrilase with a predicted role in the degradation of cyanide

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Conserved upstream open reading frame (uORF) of AN8723

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protein of unknown function

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Ortholog of A. fumigatus nmt1 and S. cerevisiae THI13

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Conserved upstream open reading frame (uORF) of AN8076

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Predicted DNA binding protein

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Putative thioredoxin reductase

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Protein with homology to Saccharomyces cerevisiae Snf7p/Vps32p

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3-carboxymuconolactone hydrolase, putative

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Thioredoxin reductase with a predicted role in pyrimidine metabolism

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Conserved upstream open reading frame (uORF) of AN5966

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Putative zinc-finger DNA binding protein

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Cell wall alpha-1,3-glucan synthase ags1, putative

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Conserved upstream open reading frame (uORF) of AN5885/agsA

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Conserved upstream open reading frame (uORF) of AN6642/enaA

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Conserved upstream open reading frame (uORF) of AN6642/enaA

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Potassium-transporting ATPase, putative

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Mitochondrial ribosomal protein L4

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Putative mRNA-binding protein

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Conserved upstream open reading frame (uORF) of AN1341/vps29

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Membrane coat complex Retromer subunit

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Protein with a predicted role in negative regulation of gluconeogenesis and protein targeting to vacuole

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Conserved upstream open reading frame (uORF) that mediates repression of the AN1179 protein in vitro

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Putative voltage-gated calcium channel

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Conserved upstream open reading frame (uORF) of AN1168/cch1

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Putative nucleoside phosphatase

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Protein expressed at increased levels in a hapX mutant versus wild-type

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Peroxisomal long-chain acyl-CoA transporter

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Conserved upstream open reading frame (uORF) of AN1014

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protein of unknown function

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Putative vacuolar assembly protein with a predicted role in late endosome to vacuole transport via the multivesicular body sorting pathway

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Conserved upstream open reading frame (uORF) that mediates repression of an AN0244 (vps8) protein reporter in vitro

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Conserved upstream open reading frame (uORF) of AN0118/nudA

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Cytoplasmic dynein heavy chain, component of the microtubule motor protein involved in nuclear migration

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Putative nuclear pore complex with homology to Saccharomyces cerevisiae Nup192p

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Conserved upstream open reading frame (uORF) of AN1494

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Putative TATA binding protein associated factor

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DNA-directed RNA polymerase subunit E'

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Conserved upstream open reading frame (uORF) of AN1521

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Histone deacetylase complex, SIN3 component

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Possible role in diphthamide biosynthesis

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Essential protein kinase required for DNA synthesis and mitotic checkpoint control

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Putative inositol pentakisphosphate 2-kinase

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Conserved upstream open reading frame (uORF) of AN1854

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RNA polymerase III, subunit C34

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Conserved upstream open reading frame (uORF) of AN9125

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Conserved upstream open reading frame (uORF) of AN3144

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Protein with predicted role in Golgi to endosome transport, Golgi to vacuole transport, vacuole inheritance, vesicle docking involved in exocytosis and vesicle fusion

0 references

Ortholog(s) have role in regulation of transcription from RNA polymerase II promoter and SWI/SNF complex, mitotic spindle pole body localization

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Conserved upstream open reading frame (uORF) of AN2905

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Conserved upstream open reading frame (uORF) of AN2902

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RNA polymerase II C-terminal domain protein phosphatase

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Conserved upstream open reading frame (uORF) of AN5151/gprP

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Putative G-protein coupled receptor

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Nuclear pore complex protein with homology to human NUP98/NUP96

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Conserved upstream open reading frame (uORF) of AN5627/sonB

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Conserved upstream open reading frame (uORF) of AN5528

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Mitochondrial Fe/S cluster exporter

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Putative splicing factor 3b, subunit 3

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Conserved upstream open reading frame (uORF) of AN5452

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Mitochondrially encoded subunit 4L of NADH dehydrogenase

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Mitochondrially-encoded subunit 5 of NADH dehydrogenase

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Mitochondrially encoded subunit 2 of NADH dehydrogenase

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protein of unknown function

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Protein of unknown function, encoded on the mitochondrial genome

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Cytochrome b, putative

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Group I intron maturase encoded by the first exon and part of the intron of the mitochondrial cobA gene

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Mitochondrially encoded subunit 1 of NADH dehydrogenase

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Mitochondrially encoded subunit 4 of NADH dehydrogenase

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Putative mitochondrial ATP synthase subunit 8

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Mitochondrially encoded subunit 6 of the F0 sector of mitochondrial F1F0 ATP synthase

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Mitochondrially encoded subunit 6 of NADH dehydrogenase

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Subunit III of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain

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Putative mitochondrial ribosomal protein S5, encoded within the intron of the large mitochondrial ribosomal rRNA gene (L-rRNA)

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Subunit I of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain

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Ortholog(s) have endonuclease activity

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Has domain(s) with predicted DNA binding, endonuclease activity and role in intron homing

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ATP synthase subunit 9, mitochondrial, putative

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Mitochondrially encoded subunit 3 of NADH dehydrogenase

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Subunit II of cytochrome c oxidase, which is the terminal member of the mitochondrial inner membrane electron transport chain

0 references

author

Sam Griffiths-Jones

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

James Galagan

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Christina A Cuomo

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Li-Jun Ma

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Jennifer R Wortman

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Gerhard H Braus

18

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Christophe d'Enfert

21

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Gustavo H. Goldman

23

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

John H Doonan

26

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Arnab Pain

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Miguel A Penalva

33

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Berl R Oakley

34

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Michelle Momany

35

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

David W. Denning

41

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Paul Dyer

47

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Matthew S. Sachs

48

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

author name string

Su-In Lee

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Meray Baştürkmen

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

John Clutterbuck

10

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Vladimir Kapitonov

11

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Claudio Scazzocchio

13

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Mark Farman

14

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Seth Purcell

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Steve Harris

17

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Oliver Draht

19

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Silke Busch

20

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Deborah Bell-Pedersen

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Jaehyuk Yu

27

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Kay Vienken

28

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Michael Freitag

30

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Toshihiro Tanaka

36

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Toshitaka Kumagai

37

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Kiyoshi Asai

38

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Masayuki Machida

39

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Mark Caddick

42

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Michael Hynes

43

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Mathieu Paoletti

44

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Reinhard Fischer

45

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Bruce Miller

46

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Sarah E Calvo

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Serafim Batzoglou

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Christina C Spevak

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Jerzy Jurka

12

1 reference

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14 January 2020

Jonathan Butler

15

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Christiane Bouchier

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Eric U Selker

31

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

David B Archer

32

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

William C Nierman

40

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Stephen A Osmani

49

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

Bruce W Birren

50

1 reference

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14 January 2020

language of work or name

English

0 references

publication date

1 December 2005

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

volume

438

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

page(s)

1105-1115

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

14 January 2020

issue

7071

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1038/nature04341

14 January 2020

exact match

0 references

cites work

Genetic engineering of filamentous fungi.

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Genome sequencing and analysis of Aspergillus oryzae

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Genome-scale approaches to resolving incongruence in molecular phylogenies

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Genome evolution in yeasts

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Structural dynamics of eukaryotic chromosome evolution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Fourfold faster rate of genome rearrangement in nematodes than in Drosophila.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Inversions and gene order shuffling in Anopheles gambiae and A. funestus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Evidence for sexuality in the opportunistic fungal pathogen Aspergillus fumigatus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Mating type and mating strategies in Neurospora

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Genomics reveals sexual secrets of Aspergillus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Evolution of the fungal self-fertile reproductive life style from self-sterile ancestors.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Evolution of the MAT locus and its Ho endonuclease in yeast species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Loss of meiosis in Aspergillus.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Mating type sequences in asexually reproducing Fusarium species.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Induction of mating in Candida albicans by construction of MTLa and MTLalpha strains.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Evidence for mating of the "asexual" yeast Candida albicans in a mammalian host.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

LAGAN and Multi-LAGAN: efficient tools for large-scale multiple alignment of genomic DNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Sequencing and comparison of yeast species to identify genes and regulatory elements

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Transcriptional autoregulation and inhibition of mRNA translation of amino acid regulator gene cpcA of filamentous fungus Aspergillus nidulans

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

The tryptophan synthase-encoding trpB gene of Aspergillus nidulans is regulated by the cross-pathway control system.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Regulation of hisHF transcription of Aspergillus nidulans by adenine and amino acid limitation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Extensive association of functionally and cytotopically related mRNAs with Puf family RNA-binding proteins in yeast

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Mitochondrial beta-oxidation in Aspergillus nidulans.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

The biochemistry of peroxisomal beta-oxidation in the yeast Saccharomyces cerevisiae.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Proteomic analysis of rat liver peroxisome: presence of peroxisome-specific isozyme of Lon protease

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Polarity in filamentous fungi: moving beyond the yeast paradigm.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

RIP: the evolutionary cost of genome defense.

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Genome Compaction and Stability in Microsporidian Intracellular Parasites

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Phylogenetic relationships of five species ofAspergillusand related taxa as deduced by comparison of sequences of small subunit ribosomal RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

The dynamics of chromosome evolution in birds and mammals

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

Evolutionary Relationships in Aspergillus Section Fumigati Inferred from Partial b-Tubulin and Hydrophobin DNA Sequences

21 January 2018

1 reference

https://api.crossref.org/works/10.1038%2FNATURE04341

21 January 2018

Identifiers

DOI

10.1038/NATURE04341

2 references

Consolidated OpenCitations Corpus – April 2017

863746

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json

Dimensions Publication ID

14 January 2020

1043767540

0 references

863746

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

2 references

863746

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:16372000%20AND%20SRC:MED&resulttype=core&format=json