(Q24248165)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

title

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

1 reference

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

Desmond G. Higgins

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

author name string

J D Thompson

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

F Plewniak

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

F Jeanmougin

4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

language of work or name

English

0 references

publication date

1 December 1997

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

published in

Nucleic Acids Research

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

volume

25

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

issue

24

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

page(s)

4876-4882

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

PairWise and SearchWise: finding the optimal alignment in a simultaneous comparison of a protein profile against all DNA translation frames

8 November 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

SAGA: sequence alignment by genetic algorithm

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Significant improvement in accuracy of multiple protein sequence alignments by iterative refinement as assessed by reference to structural alignments

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

CLUSTAL: a package for performing multiple sequence alignment on a microcomputer

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

SEAVIEW and PHYLO_WIN: two graphic tools for sequence alignment and molecular phylogeny

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Using CLUSTAL for multiple sequence alignments

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Progressive sequence alignment as a prerequisite to correct phylogenetic trees

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Database of homology-derived protein structures and the structural meaning of sequence alignment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

A workbench for multiple alignment construction and analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

CLUSTAL V: improved software for multiple sequence alignment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Weighting in sequence space: a comparison of methods in terms of generalized sequences

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Prediction of protein secondary structure and active sites using the alignment of homologous sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Automatic generation of primary sequence patterns from sets of related protein sequences

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

MALIGNED: a multiple sequence alignment editor

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Improved sensitivity of profile searches through the use of sequence weights and gap excision.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

HOMED: a homologous sequence editor.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

A flexible method to align large numbers of biological sequences.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Motif recognition and alignment for many sequences by comparison of dot-matrices.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

A new approach for displaying identities and differences among aligned amino acid sequences

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Protein sequence alignments: a strategy for the hierarchical analysis of residue conservation.

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Amino acid substitution during functionally constrained divergent evolution of protein sequences.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

Evolutionary divergence plots of homologous proteins

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=147148

ALMA, an editor for large sequence alignments

29 November 2018

1 reference

12 December 2020

SOMAP: a novel interactive approach to multiple protein sequences alignment

1 reference

12 December 2020

DCSE, an interactive tool for sequence alignment and secondary structure research

1 reference

12 December 2020

Position-based sequence weights

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/25.24.4876

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9396791%20AND%20SRC:MED&resulttype=core&format=json

8 November 2019

PubMed publication ID

9396791

2 references