(Q24532865)

4 July 2017

NMR data collection and analysis protocol for high-throughput protein structure determination (English)

1 reference

protein structure determination

4 July 2017

0 references

0 references

1 reference

8

0 references

Alexander Lemak

9

0 references

Gaetano T. Montelione

13

Gaetano T Montelione

Gaetano T

Montelione

1 reference

4 July 2017

14

Thomas Szyperski

Thomas

Szyperski

1 reference

19 October 2023

Cheryl H Arrowsmith

12

Cheryl H

Arrowsmith

1 reference

19 October 2023

9

Alexander Lemak

1 reference

4 July 2017

8

Adelinda Yee

1 reference

4 July 2017

1

Gaohua Liu

Gaohua

Liu

1 reference

4 July 2017

3

Hanudatta S Atreya

Hanudatta S

Atreya

1 reference

4 July 2017

Yang Shen

2

Yang

Shen

1 reference

4 July 2017

David Parish

4

David

Parish

1 reference

4 July 2017

Ying Shao

5

Ying

Shao

1 reference

4 July 2017

Dinesh K Sukumaran

6

Dinesh K

Sukumaran

1 reference

4 July 2017

Rong Xiao

7

Rong

Xiao

1 reference

4 July 2017

Aneerban Bhattacharya

10

Aneerban

Bhattacharya

1 reference

4 July 2017

Thomas A Acton

11

Thomas A

Acton

1 reference

4 July 2017

language of work or name

English

0 references

publication date

18 July 2005

1 reference

Proceedings of the National Academy of Sciences of the United States of America

4 July 2017

1 reference

4 July 2017

102

1 reference

4 July 2017

10487-10492

1 reference

4 July 2017

30

1 reference

An NMR approach to structural proteomics

4 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Exploring steric constraints on protein mutations using MAGE/PROBE

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

The program XEASY for computer-supported NMR spectral analysis of biological macromolecules

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Refinement of protein structures in explicit solvent

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Protein NMR structure determination with automated NOE assignment using the new software CANDID and the torsion angle dynamics algorithm DYANA

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Protein backbone angle restraints from searching a database for chemical shift and sequence homology

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Protein structure alignment by incremental combinatorial extension (CE) of the optimal path

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

24 March 2017

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

24 March 2017

https://api.crossref.org/works/10.1073/PNAS.0504338102

Torsion angle dynamics for NMR structure calculation with the new program DYANA

22 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

AQUA and PROCHECK-NMR: programs for checking the quality of protein structures solved by NMR

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

MOLMOL: a program for display and analysis of macromolecular structures

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Dali: a network tool for protein structure comparison

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

SCOP: a structural classification of proteins database for the investigation of sequences and structures

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

An integrated platform for automated analysis of protein NMR structures.

24 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Rapid NMR data collection

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Protein NMR recall, precision, and F-measure scores (RPF scores): structure quality assessment measures based on information retrieval statistics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

The role of unstructured extensions in the rotational diffusion properties of a globular protein: the example of the titin i27 module

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

G-matrix Fourier transform NMR spectroscopy for complete protein resonance assignment

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

1H(C) and 1H(N) total NOE correlations in a single 3D NMR experiment. 15N and 13C time-sharing in t1 and t2 dimensions for simultaneous data acquisition.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Rapid analysis of protein backbone resonance assignments using cryogenic probes, a distributed Linux-based computing architecture, and an integrated set of spectral analysis tools

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Macromolecular structure determination by NMR spectroscopy.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

GFT NMR, a new approach to rapidly obtain precise high-dimensional NMR spectral information.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Reduced-dimensionality NMR spectroscopy for high-throughput protein resonance assignment

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Automatic determination of protein backbone resonance assignments from triple resonance nuclear magnetic resonance data

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Aromatic ring-flipping in supercooled water: implications for NMR-based structural biology of proteins.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

Protein NMR spectroscopy in structural genomics

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1180791

GFT NMR experiments for polypeptide backbone and 13Cbeta chemical shift assignment.

27 September 2017

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504338102

Robotic cloning and Protein Production Platform of the Northeast Structural Genomics Consortium.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504338102

Automatic target selection for structural genomics on eukaryotes.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504338102

The Southeast Collaboratory for Structural Genomics: a high-throughput gene to structure factory.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.0504338102

Resonance assignment of proteins with high shift degeneracy based on 5D spectral information encoded in G2FT NMR experiments

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/16027363

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1073/PNAS.0504338102

1 reference

release_undcmfmtzzckdofsbnadovphz4

4 July 2017

0 references

0 references

PMCID

1180791

1 reference

4 July 2017

1 reference