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The Protein Model Portal
scientific article
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instance of
scholarly article
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title
The Protein Model Portal
(English)
0 references
main subject
structural biology
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author
Helen M. Berman
series ordinal
7
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Torsten Schwede
series ordinal
9
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John Westbrook
series ordinal
6
object named as
John D Westbrook
0 references
Lorenza Bordoli
series ordinal
8
object named as
Lorenza Bordoli
0 references
Konstantin Arnold
series ordinal
1
object named as
Konstantin Arnold
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Michael Podvinec
series ordinal
5
object named as
Michael Podvinec
0 references
author name string
Florian Kiefer
series ordinal
2
0 references
Jürgen Kopp
series ordinal
3
0 references
James N D Battey
series ordinal
4
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language of work or name
English
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publication date
March 2009
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published in
Journal of Structural and Functional Genomics
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volume
10
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page(s)
1-8
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issue
1
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exact match
https://scigraph.springernature.com/pub.10.1007/s10969-008-9048-5
0 references
cites work
The SWISS-MODEL Repository and associated resources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
Integrating biological data--the Distributed Annotation System
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
The Pfam protein families database
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
The Sorcerer II Global Ocean Sampling expedition: expanding the universe of protein families
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
retrieved
7 April 2017
The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
Homology modeling using parametric alignment ensemble generation with consensus and energy-based model selection
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
The SWISS-MODEL Repository: new features and functionalities
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PubMed Central
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7 April 2017
MODBASE: a database of annotated comparative protein structure models and associated resources
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
Gene3D: modelling protein structure, function and evolution
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
The Universal Protein Resource (UniProt)
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
The SWISS-MODEL Repository of annotated three-dimensional protein structure homology models
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
SWISS-MODEL: An automated protein homology-modeling server
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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PubMed Central
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7 April 2017
Raster3D Version 2.0. A program for photorealistic molecular graphics
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7 April 2017
Automated server predictions in CASP7
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7 April 2017
Assessment of CASP7 predictions for template-based modeling targets
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
Announcing the worldwide Protein Data Bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
Protein structure prediction and structural genomics
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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7 April 2017
The protein structure initiative structural genomics knowledgebase.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
Template-based modeling and free modeling by I-TASSER in CASP7.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
Integration of bioinformatics resources for functional analysis of gene expression and proteomic data
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
Strategies for high-throughput comparative modeling: applications to leverage analysis in structural genomics and protein family organization.
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
Utility of homology models in the drug discovery process.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
AstexViewer: a visualisation aid for structure-based drug design
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
MAMMOTH (matching molecular models obtained from theory): an automated method for model comparison
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 September 2017
Computational Structural Biology
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Crossref
reference URL
https://api.crossref.org/works/10.1007%2FS10969-008-9048-5
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21 January 2018
The InterPro database and tools for protein domain analysis
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stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
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28 November 2018
Harnessing knowledge from structural genomics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
retrieved
28 November 2018
Outcome of a workshop on archiving structural models of biological macromolecules.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2704613
retrieved
28 November 2018
About the use of protein models
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19037750
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
MODBASE, a database of annotated comparative protein structure models and associated resources.
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1007%2FS10969-008-9048-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
MOLSCRIPT: a program to produce both detailed and schematic plots of protein structures
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1007%2FS10969-008-9048-5
retrieved
7 January 2021
based on heuristic
inferred from DOI database lookup
Identifiers
DOI
10.1007/S10969-008-9048-5
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1328643
Dimensions Publication ID
1006341800
0 references
OpenCitations bibliographic resource ID
1328643
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1328643
PMCID
2704613
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1328643
PubMed ID
19037750
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1328643
ResearchGate publication ID
23501542
0 references
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