(Q24657805)

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Kinetics of polynucleotide phosphorylase: comparison of enzymes from Streptomyces and Escherichia coli and effects of nucleoside diphosphates

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scholarly article

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Kinetics of polynucleotide phosphorylase: comparison of enzymes from Streptomyces and Escherichia coli and effects of nucleoside diphosphates (English)

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Escherichia coli

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author name string

Samantha A Chang

1

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Madeline Cozad

2

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George A Mackie

3

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George H Jones

4

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language of work or name

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publication date

January 2008

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Journal of Bacteriology

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190

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1

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98-106

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Mfold web server for nucleic acid folding and hybridization prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

7 April 2017

Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

7 April 2017

A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

7 April 2017

A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

7 April 2017

An important role for RNase R in mRNA decay

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Organization and expression of the polynucleotide phosphorylase gene (pnp) of Streptomyces: Processing of pnp transcripts in Streptomyces antibioticus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

The Streptomyces coelicolor polynucleotide phosphorylase homologue, and not the putative poly(A) polymerase, can polyadenylate RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Polynucleotide phosphorylase functions both as a 3' right-arrow 5' exonuclease and a poly(A) polymerase in Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Action of RNase II and polynucleotide phosphorylase against RNAs containing stem-loops of defined structure

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

mRNA degradation in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

mRNA degradation. A tale of poly(A) and multiprotein machines.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Polyadenylation of mRNA in prokaryotes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Guanosine pentaphosphate synthetase from Streptomyces antibioticus is also a polynucleotide phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

The gene coding for polynucleotide phosphorylase in Photorhabdus sp. strain K122 is induced at low temperatures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Mapping the 5' and 3' ends of Tetrahymena thermophila mRNAs using RNA ligase mediated amplification of cDNA ends (RLM-RACE)

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Polyadenylylation helps regulate mRNA decay in Escherichia coli.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Kinetics of Polymerization and Phosphorolysis Reactions of E. coli Polynucleotide Phosphorylase. Role of Oligonucleotides in Polymerization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

The effect of chain length on the phosphorolysis of oligonucleotides by polynucleotide phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Mechanism of polynucleotide phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

E.coli polynucleotide phosphorylase expression is autoregulated through an RNase III-dependent mechanism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Identification of the gene for an Escherichia coli poly(A) polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Kinetic studies on the phosphorolysis of polynucleotides by polynucleotide phosphorylase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Polyadenylation of mRNA in bacteria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 September 2017

Poly(A) polymerase activity and RNA polyadenylation in Streptomyces coelicolor A3(2).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

30 May 2018

Kinetics of Polymerization and Phosphorolysis Reactions of Escherichia coli Polynucleotide Phosphorylase. Evidence for Multiple Binding of Polynucleotide in Phosphorolysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

30 May 2018

Downregulation of Bamboo mosaic virus replication requires the 5' apical hairpin stem loop structure and sequence of satellite RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 November 2018

The absB gene encodes a double strand-specific endoribonuclease that cleaves the read-through transcript of the rpsO-pnp operon in Streptomyces coelicolor

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 November 2018

Overexpression and purification of untagged polynucleotide phosphorylases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 November 2018

Overexpression of the polynucleotide phosphorylase gene (pnp) of Streptomyces antibioticus affects mRNA stability and poly(A) tail length but not ppGpp levels

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 November 2018

cDNA cloning confirms the polyadenylation of RNA decay intermediates in Streptomyces coelicolor.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2223728

28 November 2018

Rapid mutagenesis and purification of phage RNA polymerases

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Degradation of mRNA in Escherichia coli: an old problem with some new twists

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA 3'-tail synthesis in Streptomyces: in vitro and in vivo activities of RNase PH, the SCO3896 gene product and polynucleotide phosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

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inferred from PubMed ID database lookup

Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Residual polyadenylation in poly(A) polymerase I (pcnB ) mutants of Escherichia coli does not result from the activity encoded by the f310 gene

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Polyadenylation of Escherichia coli transcripts plays an integral role in regulating intracellular levels of polynucleotide phosphorylase and RNase E

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from Escherichia coli

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Kinetic analysis of the phosphorolysis of oligonucleotides by polynucleotide phosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Initiation, attenuation and RNase III processing of transcripts from the Escherichia coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/17965156

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1128/JB.00327-07

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release_qbwad3stxrb4xj5kdufij3pj4u

1 reference

https://api.fatcat.wiki/v0/release/qbwad3stxrb4xj5kdufij3pj4u

24 November 2022

based on heuristic

mapped directly with Wikidata item

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