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The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

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The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data (English)

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1

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John Markley

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4

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John L Markley

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Haruki Nakamura

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3

object named as

Haruki Nakamura

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Kim Henrick

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2

object named as

Kim Henrick

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language of work or name

English

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publication date

January 2007

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published in

Nucleic Acids Research

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volume

35

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page(s)

D301-3

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Database issue

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cites work

The RCSB PDB information portal for structural genomics

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

E-MSD: improving data deposition and structure quality

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

GASH: an improved algorithm for maximizing the number of equivalent residues between two protein structures

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

The RCSB Protein Data Bank: a redesigned query system and relational database based on the mmCIF schema

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

The Protein Data Bank

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

The Protein Data Bank: a computer-based archival file for macromolecular structures

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

Announcing the worldwide Protein Data Bank

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

7 April 2017

BioMagResBank databases DOCR and FRED containing converted and filtered sets of experimental NMR restraints and coordinates from over 500 protein PDB structures

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 September 2017

PDBML: the representation of archival macromolecular structure data in XML.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 September 2017

ProMode: a database of normal mode analyses on protein molecules with a full-atom model.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 September 2017

E-MSD: an integrated data resource for bioinformatics.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 September 2017

BioMagResBank database with sets of experimental NMR constraints corresponding to the structures of over 1400 biomolecules deposited in the Protein Data Bank

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 September 2017

Creation of a nuclear magnetic resonance data repository and literature database

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stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 September 2017

Outcome of a workshop on archiving structural models of biological macromolecules.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 November 2018

eF-site and PDBjViewer: database and viewer for protein functional sites.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 November 2018

PQS: a protein quaternary structure file server.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1669775

retrieved

28 November 2018

Identifiers

DOI

10.1093/NAR/GKL971

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

638946

DBLP publication ID

journals/nar/BermanHNM07

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

OpenCitations bibliographic resource ID

638946

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

638946

ResearchGate publication ID

6657215

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(Q24675361)

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

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