(Q24676898)

22 June 2017

title

CellProfiler: image analysis software for identifying and quantifying cell phenotypes (English)

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22 June 2017

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11

Polina Golland

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22 June 2017

12

David M Sabatini

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22 June 2017

6

Ola Friman

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22 June 2017

Anne E Carpenter

1

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22 June 2017

Thouis R Jones

2

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22 June 2017

Michael R Lamprecht

3

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22 June 2017

Colin Clarke

4

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22 June 2017

In Han Kang

5

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22 June 2017

David A Guertin

7

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22 June 2017

Joo Han Chang

8

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22 June 2017

Robert A Lindquist

9

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22 June 2017

Jason Moffat

10

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22 June 2017

publication date

31 October 2006

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22 June 2017

language of work or name

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22 June 2017

volume

7

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22 June 2017

issue

10

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22 June 2017

page(s)

R100

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publication type of scholarly work

22 June 2017

review article

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describes a project that uses

CellProfiler

object named as

CellProfiler

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CZ Software Mentions: A large dataset of software mentions in the biomedical literature

CellProfiler

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cites work

Dynamic proteomics in individual human cells uncovers widespread cell-cycle dependence of nuclear proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

FlyRNAi: the Drosophila RNAi screening center database.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Objective clustering of proteins based on subcellular location patterns

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

A functional genomic analysis of cell morphology using RNA interference

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Genetic architecture of Hsp90-dependent drug resistance

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

CellProfiler: free, versatile software for automated biological image analysis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

In germ cells of mouse embryonic ovaries, the decision to enter meiosis precedes premeiotic DNA replication

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Small molecule screening by imaging

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Functional genomic analysis of RNA interference in C. elegans

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Systematic genome-wide screens of gene function

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

High content screening applied to large-scale cell biology

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Informatics and quantitative analysis in biological imaging

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

A Simple Statistical Parameter for Use in Evaluation and Validation of High Throughput Screening Assays

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Causal protein-signaling networks derived from multiparameter single-cell data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Identification of pathways regulating cell size and cell-cycle progression by RNAi

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Microarrays of lentiviruses for gene function screens in immortalized and primary cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

High-dimensional and large-scale phenotyping of yeast mutants.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Subvisual chromatin changes in cervical epithelium measured by texture image analysis and correlated with HPV.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Identification of novel mammalian growth regulatory factors by genome-scale quantitative image analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Drosophila RNAi screen reveals CD36 family member required for mycobacterial infection

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

A computerized cellular imaging system for high content analysis in Monastrol suppressor screens

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

RNAi living-cell microarrays for loss-of-function screens in Drosophila melanogaster cells.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Functional genomics using high-throughput RNA interference

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

High-throughput RNA interference screens in Drosophila tissue culture cells.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

High-content screening and profiling of drug activity in an automated centrosome-duplication assay

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Small-molecule screening and profiling by using automated microscopy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Using RNAi to catch Drosophila genes in a web of interactions: insights into cancer research

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Image analysis for automatic segmentation of cytoplasms and classification of Rac1 activation.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Advances in molecular labeling, high throughput imaging and machine intelligence portend powerful functional cellular biochemistry tools

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Gene expression and the myth of the average cell

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Image analysis and morphometry in the diagnosis of breast cancer

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

A neural network classifier capable of recognizing the patterns of all major subcellular structures in fluorescence microscope images of HeLa cells

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Segmentation of confocal microscope images of cell nuclei in thick tissue sections

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Automated recognition of patterns characteristic of subcellular structures in fluorescence microscopy images

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Nuclear texture measurements in image cytometry

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Changes in cell topography associated with transformation to malignancy

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

High-throughput RNAi screening in cultured cells: a user's guide

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Multidimensional drug profiling by automated microscopy

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

A feature set for cytometry on digitized microscopic images

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Applying watershed algorithms to the segmentation of clustered nuclei

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1794559

Texture discrimination by Gabor functions

28 November 2018

1 reference

12 December 2020

Multiplexed high content screening assays create a systems cell biology approach to drug discovery

1 reference

12 December 2020

Quantitative precision of an automated, fluorescence-based image cytometer

1 reference

12 December 2020

Effects of fixation method on image cytometric measurement of DNA content and distribution in cells stained for fluorescence with propidium iodide

1 reference

12 December 2020

Towards automated cellular image segmentation for RNAi genome-wide screening

1 reference

12 December 2020

An ecdysteroid-induced alteration in the cell cycle of cultured Drosophila cells

1 reference

12 December 2020

Combining intensity, edge and shape information for 2D and 3D segmentation of cell nuclei in tissue sections

1 reference

12 December 2020

10.1186/GB-2006-7-10-R100

Identifiers

DOI

1 reference

Dimensions Publication ID

22 June 2017

1040889351

0 references

OpenCitations bibliographic resource ID

37481

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

37481

1 reference