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Histone deacetylase HDA1 YNL021W
fungal protein found in Saccharomyces cerevisiae S288c
YNL021W
HDA1
histone deacetylase HDA1
In more languages
edit
Statements
instance of
protein
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53973
subclass of
protein
1 reference
stated in
UniProt
retrieved
19 January 2017
UniProt protein ID
P53973
part of
Histone deacetylase domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53973
Ureohydrolase domain superfamily
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53973
Histone deacetylase class II, yeast
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53973
histone deacetylases
1 reference
based on heuristic
inferred from protein domain or family
Arb2 domain, protein family
1 reference
based on heuristic
inferred from protein domain or family
found in taxon
Saccharomyces cerevisiae S288c
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53973
encoded by
HDA1
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53973
molecular function
NAD-dependent histone deacetylase activity (H3-K14 specific)
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IEA
histone deacetylase activity
determination method
IEA
IDA
2 references
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IEA
retrieved
9 May 2019
stated in
Structural and functional studies of the yeast class II Hda1 histone deacetylase complex
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IDA
hydrolase activity
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IEA
chromatin binding
determination method
IDA
1 reference
retrieved
9 May 2019
stated in
Suppressor analysis of a histone defect identifies a new function for the hda1 complex in chromosome segregation
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IDA
protein binding
determination method
IPI
3 references
retrieved
9 May 2019
stated in
Proteome survey reveals modularity of the yeast cell machinery
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
retrieved
9 May 2019
stated in
HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
retrieved
9 May 2019
stated in
Defining the budding yeast chromatin-associated interactome
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
identical protein binding
determination method
IPI
3 references
retrieved
9 May 2019
stated in
HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
retrieved
9 May 2019
stated in
Defining the budding yeast chromatin-associated interactome
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
retrieved
9 May 2019
stated in
High-quality binary protein interaction map of the yeast interactome network
GOA
curator
IntAct protein interaction database
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
cell component
nucleus
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IEA
HDA1 complex
determination method
IPI
IDA
4 references
retrieved
9 May 2019
stated in
HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IPI
retrieved
9 May 2019
stated in
HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IDA
retrieved
9 May 2019
stated in
HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IDA
retrieved
9 May 2019
stated in
HDA1 and HDA3 are components of a yeast histone deacetylase (HDA) complex
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IDA
biological process
negative regulation of transcription by RNA polymerase II
determination method
IMP
2 references
retrieved
9 May 2019
stated in
TUP1 utilizes histone H3/H2B-specific HDA1 deacetylase to repress gene activity in yeast
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IMP
retrieved
9 May 2019
stated in
H4 acetylation does not replace H3 acetylation in chromatin remodelling and transcription activation of Adr1-dependent genes.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IMP
gene silencing
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IMP
histone deacetylation
determination method
IMP
IDA
3 references
retrieved
9 May 2019
stated in
HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IMP
retrieved
9 May 2019
stated in
HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IMP
retrieved
9 May 2019
stated in
HDA2 and HDA3 are related proteins that interact with and are essential for the activity of the yeast histone deacetylase HDA1
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IDA
transcription, DNA-templated
determination method
IEA
1 reference
retrieved
27 February 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53973&geneProductId=UniProtKB:P53973
determination method
IEA
negative regulation of transcription by transcription factor localization
determination method
IGI
1 reference
retrieved
9 May 2019
stated in
A poised initiation complex is activated by SNF1.
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IGI
positive regulation of transcription by RNA polymerase II
determination method
IMP
1 reference
retrieved
9 May 2019
stated in
Regulation of the HAP1 gene involves positive actions of histone deacetylases
GOA
curator
SGD
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IMP
regulation of transcription, DNA-templated
determination method
IEA
1 reference
retrieved
27 February 2018
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?protein=P53973&geneProductId=UniProtKB:P53973
determination method
IEA
histone H3 deacetylation
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
Gene Ontology Consortium
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IEA
chromatin organization
determination method
IEA
1 reference
retrieved
9 May 2019
stated in
GOA
curator
UniProt
UniProt protein ID
P53973
reference URL
http://www.ebi.ac.uk/QuickGO/annotations?geneProductId=UniProtKB:P53973
determination method
IEA
has part(s)
Arb2 domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53973
Histone deacetylase domain
1 reference
stated in
InterPro Release 71.0
reference URL
http://www.ebi.ac.uk/interpro/protein/P53973
Identifiers
RefSeq protein ID
NP_014377
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855710
UniProt protein ID
P53973
1 reference
stated in
UniProt
retrieved
25 May 2022
UniProt protein ID
P53973
Ensembl protein ID
YNL021W
1 reference
stated in
ensembl Release 106
Ensembl protein ID
YNL021W
Saccharomyces Genome Database ID
S000004966
1 reference
stated in
NCBI Gene
retrieved
20 March 2022
Entrez Gene ID
855710
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