(Q27748806)

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The loop E-loop D region of Escherichia coli 5S rRNA: the solution structure reveals an unusual loop that may be important for binding ribosomal proteins

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The loop E-loop D region of Escherichia coli 5S rRNA: the solution structure reveals an unusual loop that may be important for binding ribosomal proteins (English)

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Escherichia coli

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protein structure

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solution structure

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based on heuristic

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author name string

A Dallas

1

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P B Moore

2

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publication date

15 December 1997

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5

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1639-53

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12

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Topography of RNA in the ribosome: location of the 3'-end of 5 S RNA on the central protuberance of the 50 S subunit

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Structure of protein-deficient 50 S ribosomal subunits. Particles without 5 S RNA-protein complex retain the L7/L12 stalk and associate with 30 S subunits.

1 reference

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5S RNA secondary structure

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Stem-loop IV of 5S rRNA lies close to the peptidyltransferase center

1 reference

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A ribonuclease-resistant region of 5S RNA and its relation to the RNA binding sites of proteins L18 and L25

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Preparation of 5S RNA-related materials for nuclear magnetic resonance and crystallography studies

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NMR analysis of helix I from the 5S RNA of Escherichia coli

1 reference

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A proposal for the conformation of loop E in Escherichia coli 5S rRNA.

1 reference

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Physical evidence for a domain structure in Escherichia coli 5 S RNA

1 reference

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An NMR study of the helix V-loop E region of the 5S RNA from Escherichia coli.

1 reference

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Effect of magnesium ion on the structure of the 5S RNA from Escherichia coli. An imino proton magnetic resonance study of the helix I, IV, and V regions of the molecule

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Assignment of NH resonances in nucleic acids using natural abundance 15 N-1 H correlation spectroscopy with spin-echo and gradient pulses

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Effects of mutation on the downfield proton nuclear magnetic resonance spectrum of the 5S RNA of Escherichia coli.

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Improved three-dimensional1H−13C−1H correlation spectroscopy of a13C-labeled protein using constant-time evolution

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An efficient procedure for assignment of the proton, carbon and nitrogen resonances in 13C/15N labeled nucleic acids

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A study of the conformation of 5S RNA by 31P NMR.

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Nucleotide conformational analysis by 31P nuclear magnetic resonance spectroscopy

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Assignment of the 31P and 1H resonances in oligonucleotides by two-dimensional NMR spectroscopy

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RNA structure and NMR spectroscopy

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The conformation of loop E of eukaryotic 5S ribosomal RNA.

1 reference

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The sarcin/ricin loop, a modular RNA.

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Use of a water flip-back pulse in the homonuclear NOESY experiment

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The structure of an essential splicing element: stem loop IIa from yeast U2 snRNA

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Determination of the backbone torsion angle epsilon in nucleic acids

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Carbon-13 NMR in conformational analysis of nucleic acid fragments. 2. A reparametrization of the Karplus equation for vicinal NMR coupling constants in CCOP and HCOP fragments.

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Torsion angle dynamics: reduced variable conformational sampling enhances crystallographic structure refinement

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Torsion-angle molecular dynamics as a new efficient tool for NMR structure calculation.

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Three-dimensional model of Escherichia coli ribosomal 5 S RNA as deduced from structure probing in solution and computer modeling.

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Nuclear Overhauser experiments at 500 MHz on the downfield proton spectra of 5S ribonucleic acid and its complex with ribosomal protein L25

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Imino proton exchange in the 5S RNA of Escherichia coli and its complex with protein L25 at 490 MHz.

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Activities of B. stearothermophilus 50 S ribosomes reconstituted with prokaryotic and eukaryotic 5 S RNA.

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On the use of T7 RNA polymerase transcripts for physical investigation

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10.1016/S0969-2126(97)00311-0

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