(Q27860912)

24 June 2017

Fiji: an open-source platform for biological-image analysis (English)

1 reference

24 June 2017

0 references

0 references

1 reference

0 references

Ignacio Arganda-Carreras

2

Ignacio Arganda-Carreras

0 references

Kevin Eliceiri

Kevin Eliceiri

14

0 references

Johannes Schindelin

1

Johannes Schindelin

1 reference

24 June 2017

16

0 references

Curtis Rueden

8

0 references

Pavel Tomancak

15

0 references

Verena Kaynig

Verena Kaynig

4

0 references

Stephan Saalfeld

Stephan Saalfeld

9

0 references

Stephan Preibisch

Stephan Preibisch

7

0 references

Jean-Yves Tinevez

Jean-Yves Tinevez

11

0 references

Mark Longair

5

Mark Longair

1 reference

24 June 2017

8

Curtis Rueden

1 reference

24 June 2017

15

Pavel Tomancak

1 reference

24 June 2017

16

Albert Cardona

1 reference

24 June 2017

Erwin Frise

3

1 reference

24 June 2017

Tobias Pietzsch

6

1 reference

24 June 2017

Benjamin Schmid

10

1 reference

24 June 2017

Daniel James White

12

1 reference

24 June 2017

Volker Hartenstein

13

1 reference

24 June 2017

language of work or name

English

0 references

publication date

28 June 2012

1 reference

24 June 2017

1 reference

24 June 2017

9

1 reference

24 June 2017

676-682

1 reference

24 June 2017

7

1 reference

describes a project that uses

24 June 2017

ImageJ

1 reference

11 June 2022

https://www.ebi.ac.uk/europepmc/webservices/rest/PMC3855844/fullTextXML

inferred from PubMed Central ID database lookup

cites work

Network anatomy and in vivo physiology of visual cortical neurons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Identifying neuronal lineages of Drosophila by sequence analysis of axon tracts

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

A high-level 3D visualization API for Java and ImageJ

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

A computational framework for ultrastructural mapping of neural circuitry

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Globally optimal stitching of tiled 3D microscopic image acquisitions

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Bioimage informatics: a new area of engineering biology

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

CellProfiler: image analysis software for identifying and quantifying cell phenotypes

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Basic local alignment search tool

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Reconstruction of zebrafish early embryonic development by scanned light sheet microscopy

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Open source bioimage informatics for cell biology

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Computer control of microscopes using µManager

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Phenotypic profiling of the human genome by time-lapse microscopy reveals cell division genes

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

A whole-genome assembly of Drosophila

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Simple Neurite Tracer: open source software for reconstruction, visualization and analysis of neuronal processes.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

BrainAligner: 3D registration atlases of Drosophila brains

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

An integrated micro- and macroarchitectural analysis of the Drosophila brain by computer-assisted serial section electron microscopy

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Imaging plant growth in 4D: robust tissue reconstruction and lineaging at cell resolution.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

As-rigid-as-possible mosaicking and serial section registration of large ssTEM datasets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Automated image analysis for high-content screening and analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Fully automatic stitching and distortion correction of transmission electron microscope images

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

V3D enables real-time 3D visualization and quantitative analysis of large-scale biological image data sets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

A 3D digital atlas of C. elegans and its application to single-cell analyses

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Automated analysis of embryonic gene expression with cellular resolution in C. elegans.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Imaging in systems biology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Automated cell lineage tracing in Caenorhabditis elegans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

The chemical basis of morphogenesis. 1953.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Software for bead-based registration of selective plane illumination microscopy data.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Systems survey of endocytosis by multiparametric image analysis.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

A quantitative spatiotemporal atlas of gene expression in the Drosophila blastoderm

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3855844

Geometrical Consistent 3D Tracing of Neuronal Processes in ssTEM Data

27 November 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22743772

12 December 2020

inferred from PubMed ID database lookup

TrakEM2 software for neural circuit reconstruction

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2019

7 January 2021

Elastic volume reconstruction from series of ultra-thin microscopy sections.

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2019

7 January 2021

Consistent and Elastic Registration of Histological Sections Using Vector-Spline Regularization

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2019

7 January 2021

Distinctive Image Features from Scale-Invariant Keypoints

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2019

7 January 2021

Snakes: Active contour models

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2019

7 January 2021

The WEKA data mining software: an update

1 reference

https://api.crossref.org/works/10.1038%2FNMETH.2019

7 January 2021

Identifiers

DOI

10.1038/NMETH.2019

1 reference

Dimensions Publication ID

24 June 2017

1026706357

0 references

Mendeley publication ID

64df4ada-d4be-3f3c-84bc-973ad51988b2

1 reference

https://www.mendeley.com/catalogue/64df4ada-d4be-3f3c-84bc-973ad51988b2/

title

Fiji: An open-source platform for... preview & related info | Mendeley (British English)

OpenCitations bibliographic resource ID

8 October 2022

20822

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

1 reference