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RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1.
scientific article
RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1
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scholarly article
1 reference
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PubMed
PubMed ID
19801658
retrieved
1 December 2016
title
RNA helicase Prp43 and its co-factor Pfa1 promote 20 to 18 S rRNA processing catalyzed by the endonuclease Nob1.
(English)
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stated in
PubMed
PubMed ID
19801658
retrieved
1 December 2016
main subject
cell biology
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RRNA-binding endoribonuclease YOR056C
1 reference
stated in
GOA release 2020-03-11
Sqs1p YNL224C
1 reference
stated in
GOA release 2020-03-11
DEAH-box ATP-dependent RNA helicase PRP43 YGL120C
1 reference
stated in
GOA release 2020-03-11
author
David Tollervey
series ordinal
5
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Ed Hurt
series ordinal
6
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Brigitte Pertschy
series ordinal
1
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Marén Gnädig
series ordinal
3
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Claudia Schneider
object named as
Claudia Schneider
series ordinal
2
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author name string
Thorsten Schäfer
series ordinal
4
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language of work or name
English
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publication date
11 December 2009
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published in
Journal of Biological Chemistry
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stated in
PubMed
PubMed ID
19801658
retrieved
1 December 2016
volume
284
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page(s)
35079-91
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issue
50
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on focus list of Wikimedia project
ScienceSource
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cites work
The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome
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An endoribonuclease functionally linked to perinuclear mRNP quality control associates with the nuclear pore complexes
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The exosome contains domains with specific endoribonuclease, exoribonuclease and cytoplasmic mRNA decay activities.
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20 March 2017
SMG6 promotes endonucleolytic cleavage of nonsense mRNA in human cells
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Endonucleolytic RNA cleavage by a eukaryotic exosome
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PubMed Central
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SMG6 is the catalytic endonuclease that cleaves mRNAs containing nonsense codons in metazoan
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Quantitative analysis of snoRNA association with pre-ribosomes and release of snR30 by Rok1 helicase
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20 March 2017
Ntr1 activates the Prp43 helicase to trigger release of lariat-intron from the spliceosome
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PubMed Central
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20 March 2017
Ltv1 is required for efficient nuclear export of the ribosomal small subunit in Saccharomyces cerevisiae
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20 March 2017
Yeast ntr1/spp382 mediates prp43 function in postspliceosomes.
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PubMed Central
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20 March 2017
Hrr25-dependent phosphorylation state regulates organization of the pre-40S subunit
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PubMed Central
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20 March 2017
Prp43p is a DEAH-box spliceosome disassembly factor essential for ribosome biogenesis
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PubMed Central
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20 March 2017
The splicing factor Prp43p, a DEAH box ATPase, functions in ribosome biogenesis
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PubMed Central
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20 March 2017
The putative NTPase Fap7 mediates cytoplasmic 20S pre-rRNA processing through a direct interaction with Rps14.
1 reference
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PubMed Central
reference URL
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20 March 2017
The splicing ATPase prp43p is a component of multiple preribosomal particles
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The Putative RNA Helicase Dbp4p Is Required for Release of the U14 snoRNA from Preribosomes in Saccharomyces cerevisiae
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PubMed Central
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20 March 2017
PIN domain of Nob1p is required for D-site cleavage in 20S pre-rRNA
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The carboxy-terminal extension of yeast ribosomal protein S14 is necessary for maturation of 43S preribosomes.
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The path from nucleolar 90S to cytoplasmic 40S pre-ribosomes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Nob1p is required for cleavage of the 3' end of 18S rRNA
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Making ribosomes
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Prp43 is an essential RNA-dependent ATPase required for release of lariat-intron from the spliceosome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The comparative RNA web (CRW) site: an online database of comparative sequence and structure information for ribosomal, intron, and other RNAs
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PubMed Central
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20 March 2017
Identification of a 60S preribosomal particle that is closely linked to nuclear export.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Ski7p G protein interacts with the exosome and the Ski complex for 3'-to-5' mRNA decay in yeast
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Recognition of cognate transfer RNA by the 30S ribosomal subunit
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
An aminoacylation-dependent nuclear tRNA export pathway in yeast
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PubMed Central
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20 March 2017
Ribosome synthesis in Saccharomyces cerevisiae
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20 March 2017
Synthetic lethality with conditional dbp6 alleles identifies rsa1p, a nucleoplasmic protein involved in the assembly of 60S ribosomal subunits
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The 3' to 5' degradation of yeast mRNAs is a general mechanism for mRNA turnover that requires the SKI2 DEVH box protein and 3' to 5' exonucleases of the exosome complex
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Dob1p (Mtr4p) is a putative ATP-dependent RNA helicase required for the 3' end formation of 5.8S rRNA in Saccharomyces cerevisiae
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Fal1p is an essential DEAD-box protein involved in 40S-ribosomal-subunit biogenesis in Saccharomyces cerevisiae
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
Dbp3p, a putative RNA helicase in Saccharomyces cerevisiae, is required for efficient pre-rRNA processing predominantly at site A3.
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The 3' end of yeast 5.8S rRNA is generated by an exonuclease processing mechanism
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2787369
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20 March 2017
The tandem affinity purification (TAP) method: a general procedure of protein complex purification
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PubMed Central
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20 March 2017
A versatile toolbox for PCR-based tagging of yeast genes: new fluorescent proteins, more markers and promoter substitution cassettes
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20 March 2017
The post-transcriptional steps of eukaryotic ribosome biogenesis
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20 March 2017
The many pathways of RNA degradation
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7 April 2017
Ribosome assembly in eukaryotes
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7 April 2017
Pre-ribosomes on the road from the nucleolus to the cytoplasm
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7 April 2017
Structure of the 80S ribosome from Saccharomyces cerevisiae--tRNA-ribosome and subunit-subunit interactions
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Two nuclear mutations that block mitochondrial protein import in yeast
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7 April 2017
Linear ubiquitin fusion to Rps31 and its subsequent cleavage are required for the efficient production and functional integrity of 40S ribosomal subunits
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29 September 2017
Dynamic interactions of Ntr1-Ntr2 with Prp43 and with U5 govern the recruitment of Prp43 to mediate spliceosome disassembly
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29 September 2017
The long unwinding road of RNA helicases
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29 September 2017
Ribosome biogenesis: of knobs and RNA processing
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29 September 2017
Prp43: An RNA helicase-like factor involved in spliceosome disassembly
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29 September 2017
The yeast protein Arc1p binds to tRNA and functions as a cofactor for the methionyl- and glutamyl-tRNA synthetases
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29 September 2017
Fragments of the internal transcribed spacer 1 of pre-rRNA accumulate in Saccharomyces cerevisiae lacking 5'----3' exoribonuclease 1
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21 January 2018
Identification of cis-acting elements involved in 3'-end formation of Saccharomyces cerevisiae 18S rRNA.
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21 January 2018
G-patch: a new conserved domain in eukaryotic RNA-processing proteins and type D retroviral polyproteins
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21 January 2018
Internal transcribed spacer 1 of the yeast precursor ribosomal RNA. Higher order structure and common structural motifs
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19801658
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
rRNA maturation as a "quality" control step in ribosomal subunit assembly in Dictyostelium discoideum
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/19801658
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1074/JBC.M109.040774
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3051099
OpenCitations bibliographic resource ID
3051099
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3051099
PMCID
2787369
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3051099
PubMed ID
19801658
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3051099
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