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Extensive genetic interactions between PRP8 and PRP17/CDC40, two yeast genes involved in pre-mRNA splicing and cell cycle progression
scientific article
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scholarly article
1 reference
stated in
PubMed
PubMed ID
10628969
retrieved
1 December 2016
title
Extensive genetic interactions between PRP8 and PRP17/CDC40, two yeast genes involved in pre-mRNA splicing and cell cycle progression
(English)
1 reference
stated in
PubMed
PubMed ID
10628969
retrieved
1 December 2016
main subject
U4/U6-U5 snRNP complex subunit PRP8 YHR165C
1 reference
stated in
GOA release 2020-03-11
Cdc40p YDR364C
1 reference
stated in
GOA release 2020-03-11
author name string
S Ben-Yehuda
series ordinal
1
0 references
M Kupiec
series ordinal
5
0 references
J D Beggs
series ordinal
4
0 references
I Dix
series ordinal
3
0 references
C S Russell
series ordinal
2
0 references
language of work or name
English
0 references
publication date
January 2000
0 references
published in
Genetics
1 reference
stated in
PubMed
PubMed ID
10628969
retrieved
1 December 2016
volume
154
0 references
page(s)
61-71
0 references
issue
1
0 references
cites work
Identification and functional analysis of hPRP17, the human homologue of the PRP17/CDC40 yeast gene involved in splicing and cell cycle control
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Synthetic lethality of yeast slt mutations with U2 small nuclear RNA mutations suggests functional interactions between U2 and U5 snRNPs that are important for both steps of pre-mRNA splicing
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20 March 2017
Human homologs of yeast prp16 and prp17 reveal conservation of the mechanism for catalytic step II of pre-mRNA splicing
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PubMed Central
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Crystal structures of human DNA polymerase beta complexed with DNA: implications for catalytic mechanism, processivity, and fidelity
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20 March 2017
Prp16p, Slu7p, and Prp8p interact with the 3' splice site in two distinct stages during the second catalytic step of pre-mRNA splicing
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PubMed Central
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Structural basis for broad specificity in alpha-lytic protease mutants
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PRP16 is an RNA-dependent ATPase that interacts transiently with the spliceosome
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PubMed Central
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20 March 2017
New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites
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PubMed Central
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20 March 2017
5-Fluoroorotic acid as a selective agent in yeast molecular genetics
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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20 March 2017
A rapid and simple method for preparation of RNA from Saccharomyces cerevisiae
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20 March 2017
The ancient regulatory-protein family of WD-repeat proteins
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PubMed Central
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20 March 2017
Cell cycle checkpoints: preventing an identity crisis
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7 April 2017
Protein functions in pre-mRNA splicing
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PubMed Central
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7 April 2017
The structure and function of proteins involved in mammalian pre-mRNA splicing
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PubMed Central
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7 April 2017
Dynamic RNA-RNA interactions in the spliceosome
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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7 April 2017
Messenger RNA Splicing in Yeast: Clues to Why the Spliceosome Is a Ribonucleoprotein
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PubMed Central
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7 April 2017
Cyclin E associates with components of the pre-mRNA splicing machinery in mammalian cells
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PubMed Central
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29 September 2017
Mutational analysis of the yeast DEAH-box splicing factor Prp16.
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PubMed Central
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29 September 2017
Functional and physical interaction between the yeast splicing factors Slu7 and Prp18.
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
Mutagenesis of the yeast gene PRP8 reveals domains governing the specificity and fidelity of 3' splice site selection
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
29 September 2017
Genetic studies of the PRP17 gene of Saccharomyces cerevisiae: a domain essential for function maps to a nonconserved region of the protein
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
The second catalytic step of pre-mRNA splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
29 September 2017
Interaction of the yeast splicing factor PRP8 with substrate RNA during both steps of splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
The budding yeast U5 snRNP Prp8 is a highly conserved protein which links RNA splicing with cell cycle progression.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
Extensive interactions of PRP8 protein with the 5' and 3' splice sites during splicing suggest a role in stabilization of exon alignment by U5 snRNA.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
Characterization and functional ordering of Slu7p and Prp17p during the second step of pre-mRNA splicing in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
Conservation between yeast and man of a protein associated with U5 small nuclear ribonucleoprotein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
A repeating amino acid motif in CDC23 defines a family of proteins and a new relationship among genes required for mitosis and RNA synthesis
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
Affinity purification of spliceosomes reveals that the precursor RNA processing protein PRP8, a protein in the U5 small nuclear ribonucleoprotein particle, is a component of yeast spliceosomes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
An essential splicing factor, SLU7, mediates 3' splice site choice in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
RNA splicing in lower eukaryotes
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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29 September 2017
The DEAH-box splicing factor Prp16 unwinds RNA duplexes in vitro.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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2 June 2018
Regulation of pre-mRNA splicing in metazoa
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PubMed Central
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2 June 2018
Stages in the second reaction of pre-mRNA splicing: the final step is ATP independent.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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2 June 2018
Mutations in U6 snRNA that alter splice site specificity: implications for the active site.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
2 June 2018
Extraordinary sequence conservation of the PRP8 splicing factor.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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2 June 2018
Cloning and mapping of CDC40, a Saccharomyces cerevisiae gene with a role in DNA repair.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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2 June 2018
The CYC8 and TUP1 proteins involved in glucose repression in Saccharomyces cerevisiae are associated in a protein complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
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2 June 2018
Synthetic lethal mutations suggest interactions between U5 small nuclear RNA and four proteins required for the second step of splicing
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
2 June 2018
Requirement for SLU7 in yeast pre-mRNA splicing is dictated by the distance between the branchpoint and the 3' splice site.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
27 November 2018
A mechanism to enhance mRNA splicing fidelity: the RNA-dependent ATPase Prp16 governs usage of a discard pathway for aberrant lariat intermediates.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
27 November 2018
The role of Saccharomyces cerevisiae Cdc40p in DNA replication and mitotic spindle formation and/or maintenance.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
27 November 2018
A novel role for a U5 snRNP protein in 3' splice site selection.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1460917
retrieved
27 November 2018
New temperature-sensitive mutants of Saccharomyces cerevisiae affecting DNA replication
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Splicing factor Prp8 governs U4/U6 RNA unwinding during activation of the spliceosome
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Primer extension analysis of RNA
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The mutator form of polymerase beta with amino acid substitution at tyrosine 265 in the hinge region displays an increase in both base substitution and frame shift errors
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Protein-RNA interactions in the U5 snRNP of Saccharomyces cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Efficient initiation of S-phase in yeast requires Cdc40p, a protein involved in pre-mRNA splicing
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identification of a yeast snRNP protein and detection of snRNP-snRNP interactions
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10628969
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
OpenCitations bibliographic resource ID
2772682
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2772682
PMCID
1460917
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2772682
PubMed ID
10628969
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
2772682
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