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Intergenic transcription causes repression by directing nucleosome assembly
scientific article
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instance of
scholarly article
1 reference
stated in
PubMed
PubMed ID
21156811
retrieved
1 December 2016
title
Intergenic transcription causes repression by directing nucleosome assembly
(English)
1 reference
stated in
PubMed
PubMed ID
21156811
retrieved
1 December 2016
main subject
Spn1p YPR133C
1 reference
stated in
GOA release 2020-03-11
Chromatin-remodeling histone chaperone SPT6 YGR116W
1 reference
stated in
GOA release 2020-03-11
author name string
Sarah J Hainer
series ordinal
1
0 references
Robin M Monteverde
series ordinal
4
0 references
Rachel D Mitchell
series ordinal
3
0 references
Justin A Pruneski
series ordinal
2
0 references
Joseph A Martens
series ordinal
5
0 references
language of work or name
English
0 references
publication date
1 January 2011
0 references
published in
Genes & Development
1 reference
stated in
PubMed
PubMed ID
21156811
retrieved
1 December 2016
volume
25
0 references
page(s)
29-40
0 references
issue
1
0 references
cites work
Most "dark matter" transcripts are associated with known genes
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Antisense RNA stabilization induces transcriptional gene silencing via histone deacetylation in S. cerevisiae.
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Cotranscriptional set2 methylation of histone H3 lysine 36 recruits a repressive Rpd3 complex
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Intergenic transcription is required to repress the Saccharomyces cerevisiae SER3 gene
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Transcription elongation factors repress transcription initiation from cryptic sites.
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Spt16-Pob3 and the HMG protein Nhp6 combine to form the nucleosome-binding factor SPN.
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FACT facilitates transcription-dependent nucleosome alteration
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Chromatin- and transcription-related factors repress transcription from within coding regions throughout the Saccharomyces cerevisiae genome
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Toggle involving cis-interfering noncoding RNAs controls variegated gene expression in yeast
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Pervasive transcription constitutes a new level of eukaryotic genome regulation
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29 September 2017
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29 September 2017
Divergent transcription: a new feature of active promoters
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What controls nucleosome positions?
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29 September 2017
Trans-acting antisense RNAs mediate transcriptional gene cosuppression in S. cerevisiae
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29 September 2017
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29 September 2017
The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency
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29 September 2017
The DNA-encoded nucleosome organization of a eukaryotic genome
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29 September 2017
Distinct modes of regulation by chromatin encoded through nucleosome positioning signals
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29 September 2017
Stepwise chromatin remodelling by a cascade of transcription initiation of non-coding RNAs
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29 September 2017
Non-coding RNAs in imprinted gene clusters
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29 September 2017
A high-resolution atlas of nucleosome occupancy in yeast
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29 September 2017
Transcriptional interference: an unexpected layer of complexity in gene regulation
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29 September 2017
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29 September 2017
Nucleosome positioning signals in genomic DNA
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29 September 2017
Translational and rotational settings of H2A.Z nucleosomes across the Saccharomyces cerevisiae genome.
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29 September 2017
H2A.Z-mediated localization of genes at the nuclear periphery confers epigenetic memory of previous transcriptional state
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29 September 2017
A site to remember: H3K36 methylation a mark for histone deacetylation
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29 September 2017
Transcriptional noise and the fidelity of initiation by RNA polymerase II.
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29 September 2017
Repression of ADH1 and ADH3 during zinc deficiency by Zap1-induced intergenic RNA transcripts.
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29 September 2017
Cytoplasmic decay of intergenic transcripts in Saccharomyces cerevisiae
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29 September 2017
Regulation of an intergenic transcript controls adjacent gene transcription in Saccharomyces cerevisiae.
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29 September 2017
Genome-scale identification of nucleosome positions in S. cerevisiae
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29 September 2017
The Snf1 protein kinase and Sit4 protein phosphatase have opposing functions in regulating TATA-binding protein association with the Saccharomyces cerevisiae INO1 promoter
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29 September 2017
Evidence for eviction and rapid deposition of histones upon transcriptional elongation by RNA polymerase II.
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29 September 2017
Spt10-dependent transcriptional activation in Saccharomyces cerevisiae requires both the Spt10 acetyltransferase domain and Spt21
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29 September 2017
The FACT complex travels with elongating RNA polymerase II and is important for the fidelity of transcriptional initiation in vivo
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29 September 2017
Evidence that Swi/Snf directly represses transcription in S. cerevisiae
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29 September 2017
Balancing transcriptional interference and initiation on the GAL7 promoter of Saccharomyces cerevisiae
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29 September 2017
Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast.
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29 September 2017
Intergenic transcription and transinduction of the human beta-globin locus
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29 September 2017
Organization of theGAL1–GAL10intergeaic control region chromatin
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29 September 2017
A RSC/nucleosome complex determines chromatin architecture and facilitates activator binding
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2 June 2018
H3 lysine 4 di- and tri-methylation deposited by cryptic transcription attenuates promoter activation
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2 June 2018
Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription
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PubMed Central
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2 June 2018
Antisense transcription controls cell fate in Saccharomyces cerevisiae
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PubMed Central
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2 June 2018
Antagonistic forces that position nucleosomes in vivo.
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2 June 2018
Dimethylation of histone H3 at lysine 36 demarcates regulatory and nonregulatory chromatin genome-wide
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2 June 2018
Intergenic transcription through a polycomb group response element counteracts silencing
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PubMed Central
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2 June 2018
Histone chaperone spt16 promotes redeposition of the original h3-h4 histones evicted by elongating RNA polymerase.
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PubMed Central
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27 November 2018
A ncRNA modulates histone modification and mRNA induction in the yeast GAL gene cluster
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27 November 2018
Evidence for nucleosome depletion at active regulatory regions genome-wide
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PubMed Central
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27 November 2018
Intergenic transcription and developmental remodeling of chromatin subdomains in the human beta-globin locus.
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27 November 2018
From bacteria to humans, chromatin to elongation, and activation to repression: The expanding roles of noncoding RNAs in regulating transcription
1 reference
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PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21156811
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Intrinsic histone-DNA interactions and low nucleosome density are important for preferential accessibility of promoter regions in yeast
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21156811
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Nucleosome positions predicted through comparative genomics
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/21156811
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1101/GAD.1975011
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1338415
OpenCitations bibliographic resource ID
1338415
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1338415
PMCID
3012934
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1338415
PubMed ID
21156811
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stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
1338415
ResearchGate publication ID
49682198
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