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An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4p
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scholarly article
1 reference
stated in
PubMed
PubMed ID
15121833
retrieved
1 December 2016
title
An array of coactivators is required for optimal recruitment of TATA binding protein and RNA polymerase II by promoter-bound Gcn4p
(English)
1 reference
stated in
PubMed
PubMed ID
15121833
retrieved
1 December 2016
main subject
cell biology
0 references
Amino acid starvation-responsive transcription factor GCN4 YEL009C
1 reference
stated in
GOA release 2020-03-11
author name string
Hongfang Qiu
series ordinal
1
0 references
Cuihua Hu
series ordinal
2
0 references
Sungpil Yoon
series ordinal
3
0 references
Krishnamurthy Natarajan
series ordinal
4
0 references
Mark J Swanson
series ordinal
5
0 references
Alan G Hinnebusch
series ordinal
6
0 references
language of work or name
English
0 references
publication date
May 2004
0 references
published in
Molecular and Cellular Biology
1 reference
stated in
PubMed
PubMed ID
15121833
retrieved
1 December 2016
volume
24
0 references
page(s)
4104-17
0 references
issue
10
0 references
cites work
A multiplicity of coactivators is required by Gcn4p at individual promoters in vivo
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RNA polymerase II accumulation in the promoter-proximal region of the dihydrofolate reductase and gamma-actin genes
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SWI/SNF-dependent chromatin remodeling of RNR3 requires TAF(II)s and the general transcription machinery
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Differential requirement of SAGA components for recruitment of TATA-box-binding protein to promoters in vivo
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20 March 2017
Exchange of RNA polymerase II initiation and elongation factors during gene expression in vivo
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The Paf1 complex physically and functionally associates with transcription elongation factors in vivo
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Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae
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CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase
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The Swi5 activator recruits the Mediator complex to the HO promoter without RNA polymerase II.
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The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.
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20 March 2017
Yeast nuclear extract contains two major forms of RNA polymerase II mediator complexes
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20 March 2017
Characterization of CAF4 and CAF16 reveals a functional connection between the CCR4-NOT complex and a subset of SRB proteins of the RNA polymerase II holoenzyme
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20 March 2017
In vivo requirement of activator-specific binding targets of mediator
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20 March 2017
Mediator of Transcriptional Regulation
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PubMed Central
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20 March 2017
TAF-Containing and TAF-independent forms of transcriptionally active TBP in vivo.
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PubMed Central
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20 March 2017
Distinct classes of yeast promoters revealed by differential TAF recruitment
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PubMed Central
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20 March 2017
Inhibition of TATA-binding protein function by SAGA subunits Spt3 and Spt8 at Gcn4-activated promoters
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PubMed Central
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20 March 2017
The ADA complex is a distinct histone acetyltransferase complex in Saccharomyces cerevisiae
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20 March 2017
Transcriptional repression of the yeast CHA1 gene requires the chromatin-remodeling complex RSC.
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20 March 2017
Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB.
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PubMed Central
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20 March 2017
Identification of new mediator subunits in the RNA polymerase II holoenzyme from Saccharomyces cerevisiae
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20 March 2017
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
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20 March 2017
A multisubunit complex associated with the RNA polymerase II CTD and TATA-binding protein in yeast.
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20 March 2017
A multiprotein mediator of transcriptional activation and its interaction with the C-terminal repeat domain of RNA polymerase II.
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20 March 2017
NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization
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PubMed Central
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20 March 2017
The transcriptional activator GCN4 contains multiple activation domains that are critically dependent on hydrophobic amino acids
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PubMed Central
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20 March 2017
Complex formation by positive and negative translational regulators of GCN4.
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PubMed Central
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20 March 2017
The TATA-binding protein is required for transcription by all three nuclear RNA polymerases in yeast cells
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20 March 2017
New yeast-Escherichia coli shuttle vectors constructed with in vitro mutagenized yeast genes lacking six-base pair restriction sites
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20 March 2017
A method for gene disruption that allows repeated use of URA3 selection in the construction of multiply disrupted yeast strains
1 reference
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PubMed Central
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20 March 2017
Independent recruitment in vivo by Gal4 of two complexes required for transcription
1 reference
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PubMed Central
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20 March 2017
Transcription of eukaryotic protein-coding genes
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PubMed Central
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20 March 2017
SAGA is an essential in vivo target of the yeast acidic activator Gal4p
1 reference
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20 March 2017
Transcriptional profiling shows that Gcn4p is a master regulator of gene expression during amino acid starvation in yeast
1 reference
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PubMed Central
reference URL
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7 April 2017
Ordered recruitment of chromatin modifying and general transcription factors to the IFN-beta promoter
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
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7 April 2017
Binding of TBP to promoters in vivo is stimulated by activators and requires Pol II holoenzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
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7 April 2017
Transcriptional activators direct histone acetyltransferase complexes to nucleosomes
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
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7 April 2017
Molecular genetics of the RNA polymerase II general transcriptional machinery
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
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7 April 2017
Recruitment of SWI/SNF by Gcn4p Does Not Require Snf2p or Gcn5p but Depends Strongly on SWI/SNF Integrity, SRB Mediator, and SAGA
1 reference
stated in
PubMed Central
reference URL
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29 September 2017
Tails of intrigue: phosphorylation of RNA polymerase II mediates histone methylation
1 reference
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PubMed Central
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29 September 2017
The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions
1 reference
stated in
PubMed Central
reference URL
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29 September 2017
Evidence that Swi/Snf directly represses transcription in S. cerevisiae
1 reference
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PubMed Central
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29 September 2017
Components of the SAGA histone acetyltransferase complex are required for repressed transcription of ARG1 in rich medium
1 reference
stated in
PubMed Central
reference URL
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29 September 2017
Mechanism of transcription initiation and promoter escape by RNA polymerase II.
1 reference
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29 September 2017
The TATA-binding protein-associated factor yTafII19p functionally interacts with components of the global transcriptional regulator Ccr4-Not complex and physically interacts with the Not5 subunit
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
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29 September 2017
Redundant roles for the TFIID and SAGA complexes in global transcription
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
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29 September 2017
TBP-associated factors (TAFIIs): multiple, selective transcriptional mediators in common complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
The Spt components of SAGA facilitate TBP binding to a promoter at a post-activator-binding step in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
An activator binding module of yeast RNA polymerase II holoenzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
Interplay of positive and negative regulators in transcription initiation by RNA polymerase II holoenzyme
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
Histone acetyltransferase activity of yeast Gcn5p is required for the activation of target genes in vivo
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
The Gcn4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complex
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
Identification of seven hydrophobic clusters in GCN4 making redundant contributions to transcriptional activation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
Regulated degradation of the transcription factor Gcn4.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
Functional differences between yeast and human TFIID are localized to the highly conserved region
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
29 September 2017
Mediator, not holoenzyme, is directly recruited to the heat shock promoter by HSF upon heat shock
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
2 June 2018
Chromatin remodelling at the PHO8 promoter requires SWI-SNF and SAGA at a step subsequent to activator binding
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
2 June 2018
Isw1 chromatin remodeling ATPase coordinates transcription elongation and termination by RNA polymerase II.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
27 November 2018
Activator-specific recruitment of TFIID and regulation of ribosomal protein genes in yeast
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=400468
retrieved
27 November 2018
Gcn4 activator targets Gcn5 histone acetyltransferase to specific promoters independently of transcription
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The Gcn5 bromodomain co-ordinates nucleosome remodelling
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
A Transient Histone Hyperacetylation Signal Marks Nucleosomes for Remodeling at the PHO8 Promoter In Vivo
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The structural and functional organization of the yeast mediator complex
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Import of proteins into mitochondria. Extramitochondrial pools and post-translational import of mitochondrial protein precursors in vivo
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
The Saccharomyces cerevisiae DNA repair gene RAD25 is required for transcription by RNA polymerase II
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
yTAFII61 has a general role in RNA polymerase II transcription and is required by Gcn4p to recruit the SAGA coactivator complex
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Enhancement of TBP binding by activators and general transcription factors
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15121833
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.24.10.4104-4117.2004
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3439311
OpenCitations bibliographic resource ID
3439311
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3439311
PMCID
400468
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3439311
PubMed ID
15121833
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
3439311
ResearchGate publication ID
8583275
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