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DNA bending by the a1 and alpha 2 homeodomain proteins from yeast
scientific article
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instance of
scholarly article
1 reference
stated in
PubMed
PubMed ID
7739902
retrieved
1 December 2016
title
DNA bending by the a1 and alpha 2 homeodomain proteins from yeast
(English)
1 reference
stated in
PubMed
PubMed ID
7739902
retrieved
1 December 2016
main subject
Homeodomain mating type protein alpha2 YCR039C
1 reference
stated in
GOA release 2020-03-11
Transcription factor MCM1 YMR043W
1 reference
stated in
GOA release 2020-03-11
author name string
D L Smith
series ordinal
1
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A B Desai
series ordinal
2
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A D Johnson
series ordinal
3
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language of work or name
English
0 references
publication date
11 April 1995
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published in
Nucleic Acids Research
1 reference
stated in
PubMed
PubMed ID
7739902
retrieved
1 December 2016
volume
23
0 references
page(s)
1239-43
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issue
7
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cites work
The X-ray structure of an atypical homeodomain present in the rat liver transcription factor LFB1/HNF1 and implications for DNA binding
1 reference
stated in
PubMed Central
reference URL
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retrieved
20 March 2017
Yeast a1 and alpha 2 homeodomain proteins form a DNA-binding activity with properties distinct from those of either protein
1 reference
stated in
PubMed Central
reference URL
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20 March 2017
A repressor (MAT alpha 2 Product) and its operator control expression of a set of cell type specific genes in yeast
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PubMed Central
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20 March 2017
Hydroxyl radical "footprinting": high-resolution information about DNA-protein contacts and application to lambda repressor and Cro protein
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PubMed Central
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20 March 2017
Crystal structure of an engrailed homeodomain-DNA complex at 2.8 A resolution: a framework for understanding homeodomain-DNA interactions
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PubMed Central
reference URL
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20 March 2017
Ssn6-Tup1 is a general repressor of transcription in yeast
1 reference
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PubMed Central
reference URL
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20 March 2017
Nucleoprotein structures initiating DNA replication, transcription, and site-specific recombination
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PubMed Central
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20 March 2017
Transcriptional activation: a complex puzzle with few easy pieces
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PubMed Central
reference URL
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retrieved
7 April 2017
Bending of DNA by transcription factors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
Nucleosomal location of the STE6 TATA box and Mat alpha 2p-mediated repression
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
HMG domain proteins: architectural elements in the assembly of nucleoprotein structures
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
Heterodimerization of the yeast homeodomain transcriptional regulators alpha 2 and a1 induces an interfacial helix in alpha 2.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
The locus of sequence-directed and protein-induced DNA bending
1 reference
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PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes
1 reference
stated in
PubMed Central
reference URL
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29 September 2017
DNA bending is induced by a transcription factor that interacts with the human c-FOS and alpha-actin promoters
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
Why bend DNA?
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
Yeast alpha 2 repressor positions nucleosomes in TRP1/ARS1 chromatin
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
Bending and supercoiling of DNA at the attachment site of bacteriophage lambda
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
POU proteins bend DNA via the POU-specific domain
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
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29 September 2017
9 DNA bending in protein-DNA complexes
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
A molecular mechanism for combinatorial control in yeast: MCM1 protein sets the spacing and orientation of the homeodomains of an alpha 2 dimer
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
Crystal structure of a MAT alpha 2 homeodomain-operator complex suggests a general model for homeodomain-DNA interactions
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
Catabolite activator protein-induced DNA bending in transcription initiation
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
DNA inversions in phages and bacteria
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
DNA curving and bending in protein-DNA recognition
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
29 September 2017
Flexibility of the yeast alpha 2 repressor enables it to occupy the ends of its operator, leaving the center free
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
2 June 2018
DNA bending by negative regulatory proteins: Gal and Lac repressors
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
2 June 2018
DNA looping and unlooping by AraC protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
2 June 2018
Stable nucleosome positioning and complete repression by the yeast alpha 2 repressor are disrupted by amino-terminal mutations in histone H4.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
2 June 2018
Positive and negative effects of DNA bending on activation of transcription from a distant site
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
2 June 2018
A short, disordered protein region mediates interactions between the homeodomain of the yeast alpha 2 protein and the MCM1 protein
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
27 November 2018
The carboxy-terminal tail of the homeo domain protein alpha 2 is required for function with a second homeo domain protein.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
27 November 2018
Transcriptional repression directed by the yeast alpha 2 protein in vitro
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
27 November 2018
The WD repeats of Tup1 interact with the homeo domain protein alpha 2.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=306837
retrieved
27 November 2018
Protein-induced bending as a transcriptional switch
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/7739902
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Functional dissection of the yeast Cyc8–Tupl transcriptional co-repressor complex
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/7739902
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
DNA looping
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/7739902
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1093/NAR/23.7.1239
0 references
PMCID
306837
0 references
PubMed ID
7739902
1 reference
stated in
PubMed
PubMed ID
7739902
retrieved
1 December 2016
ResearchGate publication ID
31198478
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