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A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors
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scholarly article
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stated in
PubMed
PubMed ID
10082585
retrieved
1 December 2016
title
A genetic screen for ribosomal DNA silencing defects identifies multiple DNA replication and chromatin-modulating factors
(English)
1 reference
stated in
PubMed
PubMed ID
10082585
retrieved
1 December 2016
main subject
Transcriptional regulator SIN3 YOL004W
1 reference
stated in
GOA release 2020-03-11
Sap30p YMR263W
1 reference
stated in
GOA release 2020-03-11
Lrs4p YDR439W
1 reference
stated in
GOA release 2020-03-11
Histone deacetylase RPD3 YNL330C
1 reference
stated in
GOA release 2020-03-11
Irs4p YKR019C
1 reference
stated in
GOA release 2020-03-11
DNA topoisomerase 1 YOL006C
1 reference
stated in
GOA release 2020-03-11
author name string
J S Smith
series ordinal
1
0 references
E Caputo
series ordinal
2
0 references
J D Boeke
series ordinal
3
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language of work or name
English
0 references
publication date
April 1999
0 references
published in
Molecular and Cellular Biology
1 reference
stated in
PubMed
PubMed ID
10082585
retrieved
1 December 2016
volume
19
0 references
page(s)
3184-97
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issue
4
0 references
cites work
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Histone deacetylase activity of Rpd3 is important for transcriptional repression in vivo
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Redistribution of silencing proteins from telomeres to the nucleolus is associated with extension of life span in S. cerevisiae.
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Repression by Ume6 involves recruitment of a complex containing Sin3 corepressor and Rpd3 histone deacetylase to target promoters
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A novel Rap1p-interacting factor, Rif2p, cooperates with Rif1p to regulate telomere length in Saccharomyces cerevisiae.
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RLF2, a subunit of yeast chromatin assembly factor-I, is required for telomeric chromatin function in vivo
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Ultraviolet radiation sensitivity and reduction of telomeric silencing in Saccharomyces cerevisiae cells lacking chromatin assembly factor-I.
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Hir1p and Hir2p function as transcriptional corepressors to regulate histone gene transcription in the Saccharomyces cerevisiae cell cycle
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HDA1 and RPD3 are members of distinct yeast histone deacetylase complexes that regulate silencing and transcription
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The EH-domain-containing protein Pan1 is required for normal organization of the actin cytoskeleton in Saccharomyces cerevisiae
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SUM1-1, a dominant suppressor of SIR mutations in Saccharomyces cerevisiae, increases transcriptional silencing at telomeres and HM mating-type loci and decreases chromosome stability
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Repression domain of the yeast global repressor Tup1 interacts directly with histones H3 and H4.
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Role of interactions between the origin recognition complex and SIR1 in transcriptional silencing
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20 March 2017
DNA repair synthesis during base excision repair in vitro is catalyzed by DNA polymerase epsilon and is influenced by DNA polymerases alpha and delta in Saccharomyces cerevisiae
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20 March 2017
Characterization of HIR1 and HIR2, two genes required for regulation of histone gene transcription in Saccharomyces cerevisiae
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Large-scale analysis of gene expression, protein localization, and gene disruption in Saccharomyces cerevisiae
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The SIR2 gene family, conserved from bacteria to humans, functions in silencing, cell cycle progression, and chromosome stability
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Mitotic recombination in the rDNA of S. cerevisiae is suppressed by the combined action of DNA topoisomerases I and II.
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Epigenetic inheritance of transcriptional states in S. cerevisiae
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A new role for a yeast transcriptional silencer gene, SIR2, in regulation of recombination in ribosomal DNA.
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20 March 2017
Identification and characterization of genes and mutants for an N-terminal acetyltransferase from yeast.
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20 March 2017
Cloning DPB3, the gene encoding the third subunit of DNA polymerase II of Saccharomyces cerevisiae
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20 March 2017
A RAP1-interacting protein involved in transcriptional silencing and telomere length regulation
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20 March 2017
New heterologous modules for classical or PCR-based gene disruptions in Saccharomyces cerevisiae
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20 March 2017
Designer deletion strains derived from Saccharomyces cerevisiae S288C: a useful set of strains and plasmids for PCR-mediated gene disruption and other applications
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20 March 2017
A simple and efficient method for direct gene deletion in Saccharomyces cerevisiae
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20 March 2017
Multifunctional yeast high-copy-number shuttle vectors
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20 March 2017
Position effect at S. cerevisiae telomeres: reversible repression of Pol II transcription
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20 March 2017
EH: a novel protein-protein interaction domain potentially involved in intracellular sorting
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20 March 2017
The origin recognition complex, SIR1, and the S phase requirement for silencing
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20 March 2017
Amino termini of histones H3 and H4 are required for a1-alpha2 repression in yeast
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20 March 2017
Extra telomeres, but not internal tracts of telomeric DNA, reduce transcriptional repression at Saccharomyces telomeres
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PubMed Central
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20 March 2017
Modifiers of position effect are shared between telomeric and silent mating-type loci in S. cerevisiae.
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7 April 2017
DNA damage activates p53 through a phosphorylation-acetylation cascade
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7 April 2017
Transcriptional silencing of Ty1 elements in the RDN1 locus of yeast
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7 April 2017
An unusual form of transcriptional silencing in yeast ribosomal DNA
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7 April 2017
DNA polymerase epsilon links the DNA replication machinery to the S phase checkpoint
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7 April 2017
Targeting Sir proteins to sites of action: a general mechanism for regulated repression.
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29 September 2017
Hir proteins are required for position-dependent gene silencing in Saccharomyces cerevisiae in the absence of chromatin assembly factor I
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29 September 2017
Yeast Ty1 retrotransposition is stimulated by a synergistic interaction between mutations in chromatin assembly factor I and histone regulatory proteins
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29 September 2017
Distribution of a limited Sir2 protein pool regulates the strength of yeast rDNA silencing and is modulated by Sir4p
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PubMed Central
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29 September 2017
Chromatin assembly factor I contributes to the maintenance, but not the re-establishment, of silencing at the yeast silent mating loci
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PubMed Central
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29 September 2017
Separable functions of ORC5 in replication initiation and silencing in Saccharomyces cerevisiae
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29 September 2017
The yeast Cac1 protein is required for the stable inheritance of transcriptionally repressed chromatin at telomeres
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PubMed Central
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29 September 2017
Changes of telomere length cause reciprocal changes in the lifespan of mother cells in Saccharomyces cerevisiae
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29 September 2017
Evidence that the transcriptional regulators SIN3 and RPD3, and a novel gene (SDS3) with similar functions, are involved in transcriptional silencing in S. cerevisiae.
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29 September 2017
Specific DNA replication mutations affect telomere length in Saccharomyces cerevisiae
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84112
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29 September 2017
Efficient transcriptional silencing in Saccharomyces cerevisiae requires a heterochromatin histone acetylation pattern
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PubMed Central
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29 September 2017
Silencing and heritable domains of gene expression
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29 September 2017
Inactivation of topoisomerases affects transcription-dependent chromatin transitions in rDNA but not in a gene transcribed by RNA polymerase II.
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29 September 2017
Chromatin structures and transcription of rDNA in yeast Saccharomyces cerevisiae
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29 September 2017
Gene disruption with PCR products in Saccharomyces cerevisiae
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29 September 2017
A polymerase switch in the synthesis of rRNA in Saccharomyces cerevisiae
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29 September 2017
Structure and function of the nontranscribed spacer regions of yeast rDNA
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29 September 2017
SUM1, an apparent positive regulator of the cryptic mating-type loci in Saccharomyces cerevisiae
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PubMed Central
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29 September 2017
Purification and characterization of CAF-I, a human cell factor required for chromatin assembly during DNA replication in vitro
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29 September 2017
RPD3 encodes a second factor required to achieve maximum positive and negative transcriptional states in Saccharomyces cerevisiae
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PubMed Central
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29 September 2017
SUM1-1: a suppressor of silencing defects in Saccharomyces cerevisiae
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29 September 2017
Insertion of a genetic marker into the ribosomal DNA of yeast
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PubMed Central
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29 September 2017
Unique arrangement of coding sequences for 5 S, 5.8 S, 18 S and 25 S ribosomal RNA in Saccharomyces cerevisiae as determined by R-loop and hybridization analysis
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PubMed Central
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29 September 2017
Simple Mendelian inheritance of the reiterated ribosomal DNA of yeast
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PubMed Central
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29 September 2017
Direct evidence for SIR2 modulation of chromatin structure in yeast rDNA.
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PubMed Central
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2 June 2018
Molecular model for telomeric heterochromatin in yeast
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PubMed Central
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2 June 2018
The histone deacetylase RPD3 counteracts genomic silencing in Drosophila and yeast.
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PubMed Central
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2 June 2018
A useful colony colour phenotype associated with the yeast selectable/counter-selectable marker MET15.
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2 June 2018
Mutation in the silencing gene S/R4 can delay aging in S. cerevisiae
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2 June 2018
Role of hydrosulfide ions (HS-) in methylmercury resistance in Saccharomyces cerevisiae
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2 June 2018
Acetylation of HMG I(Y) by CBP turns off IFN beta expression by disrupting the enhanceosome
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27 November 2018
Origin recognition complex (ORC) in transcriptional silencing and DNA replication in S. cerevisiae.
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27 November 2018
Yeast origin recognition complex is involved in DNA replication and transcriptional silencing.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=84112
retrieved
27 November 2018
Role of DNA replication in the repression of silent mating type loci in yeast
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10082585
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Ty elements transpose through an RNA intermediate
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10082585
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Saccharomyces telomeres acquire single-strand TG1-3 tails late in S phase
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10082585
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Targeting of SIR1 protein establishes transcriptional silencing at HM loci and telomeres in yeast
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10082585
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Action of a RAP1 carboxy-terminal silencing domain reveals an underlying competition between HMR and telomeres in yeast
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10082585
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Loss of transcriptional silencing causes sterility in old mother cells of S. cerevisiae
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/10082585
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1128/MCB.19.4.3184
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
4286199
OpenCitations bibliographic resource ID
4286199
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
4286199
PMCID
84112
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
4286199
PubMed ID
10082585
1 reference
stated in
Consolidated OpenCitations Corpus – April 2017
OpenCitations bibliographic resource ID
4286199
ResearchGate publication ID
13207649
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