(Q27940351)

English

Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB.

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scholarly article

2 references

1 December 2016

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9887099%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

Intermediates in formation and activity of the RNA polymerase II preinitiation complex: holoenzyme recruitment and a postrecruitment role for the TATA box and TFIIB (English)

1 reference

Europe PubMed Central

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8 December 2019

Transcription factor TFIIB YPR086W

1 reference

GOA release 2020-03-11

3

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8 December 2019

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J A Ranish

1

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8 December 2019

N Yudkovsky

2

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8 December 2019

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1 January 1999

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8 December 2019

Genes & Development

2 references

1 December 2016

Europe PubMed Central

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8 December 2019

13

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8 December 2019

49-63

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8 December 2019

1

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Europe PubMed Central

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8 December 2019

A post-recruitment function for the RNA polymerase III transcription-initiation factor IIIB

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

A subset of TAF(II)s are integral components of the SAGA complex required for nucleosome acetylation and transcriptional stimulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

The Med proteins of yeast and their function through the RNA polymerase II carboxy-terminal domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Functional antagonism between RNA polymerase II holoenzyme and global negative regulator NC2 in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

A minimal set of RNA polymerase II transcription protein interactions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Yeast SUB1 is a suppressor of TFIIB mutations and has homology to the human co-activator PC4

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Crystal structure of a yeast TFIIA/TBP/DNA complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Co-crystal structure of TBP recognizing the minor groove of a TATA element

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Crystal structure of a yeast TBP/TATA-box complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Analysis of the yeast transcription factor TFIIA: distinct functional regions and a polymerase II-specific role in basal and activated transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

General requirement for RNA polymerase II holoenzymes in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Human general transcription factor TFIIA: characterization of a cDNA encoding the small subunit and requirement for basal and activated transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

The TBP-TFIIA interaction in the response to acidic activators in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Yeast HAP1 activator binds to two upstream activation sites of different sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

The TATA-binding protein is required for transcription by all three nuclear RNA polymerases in yeast cells

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Transcription factor IIA derepresses TATA-binding protein (TBP)-associated factor inhibition of TBP-DNA binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

The general transcription factors of RNA polymerase II

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Regulation of gene expression by TBP-associated proteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Recycling of the general transcription factors during RNA polymerase II transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

20 March 2017

Transcriptional activation by recruitment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

7 April 2017

Molecular genetics of the RNA polymerase II general transcriptional machinery

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

7 April 2017

The RNA polymerase II holoenzyme and its implications for gene regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

7 April 2017

RNA polymerase II holoenzymes and subcomplexes.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Activated transcription independent of the RNA polymerase II holoenzyme in budding yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Interplay of positive and negative regulators in transcription initiation by RNA polymerase II holoenzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

DA-complex assembly activity required for VP16C transcriptional activation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

The yeast TAF145 inhibitory domain and TFIIA competitively bind to TATA-binding protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Heat shock factor increases the reinitiation rate from potentiated chromatin templates.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

A multiplicity of mediators: alternative forms of transcription complexes communicate with transcriptional regulators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Dynamic interplay of TFIIA, TBP and TATA DNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Transcription reinitiation rate: a special role for the TATA box.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Radical mutations reveal TATA-box binding protein surfaces required for activated transcription in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Chromatin structure and RNA polymerase II connection: implications for transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Yeast and human TATA-binding proteins have nearly identical DNA sequence requirements for transcription in vitro

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

29 September 2017

Activator-mediated recruitment of the RNA polymerase II machinery is the predominant mechanism for transcriptional activation in yeast.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

The N-terminal region of yeast TFIIB contains two adjacent functional domains involved in stable RNA polymerase II binding and transcription start site selection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

Transcriptional activation independent of TFIIH kinase and the RNA polymerase II mediator in vivo.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

Assembly of the isomerized TFIIA--TFIID--TATA ternary complex is necessary and sufficient for gene activation.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

RNA polymerase II C-terminal domain required for enhancer-driven transcription

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

The yeast general transcription factor TFIIA is composed of two polypeptide subunits.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

Isolation of two genes that encode subunits of the yeast transcription factor IIA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

2 June 2018

Yeast TAFIIS in a multisubunit complex required for activated transcription.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

27 November 2018

Association of an activator with an RNA polymerase II holoenzyme.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

27 November 2018

A general mechanism for transcriptional synergy by eukaryotic activators

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

27 November 2018

Construction and analysis of yeast RNA polymerase II CTD deletion and substitution mutations.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=316368

27 November 2018

RNA polymerase II carboxy-terminal domain contributes to the response to multiple acidic activators in vitro

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mechanism for TAFs in transcriptional activation: activation domain enhancement of TFIID-TFIIA--promoter DNA complex formation

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of sua7 mutations defines a domain of TFIIB involved in transcription start site selection in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA polymerase II promoter strength in vitro may be reduced by defects at initiation or promoter clearance

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Eukaryotic activators function during multiple steps of preinitiation complex assembly

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An ATP-dependent inhibitor of TBP binding to DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

RNA polymerase II holoenzyme contains SWI/SNF regulators involved in chromatin remodeling

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of the yeast TFIIA/TBP/DNA complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Contributions of the TATA box sequence to rate-limiting steps in transcription initiation by RNA polymerase II

1 reference

https://pubmed.ncbi.nlm.nih.gov/9887099

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1101/GAD.13.1.49

1 reference

Europe PubMed Central

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8 December 2019

release_ncin3vdgmzbpbb7la3qsdosfjq

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https://api.fatcat.wiki/v0/release/ncin3vdgmzbpbb7la3qsdosfjq

24 November 2022

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mapped directly with Wikidata item

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Europe PubMed Central

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8 December 2019

2 references

1 December 2016

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:9887099%20AND%20SRC:MED&resulttype=core&format=json

8 December 2019

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