(Q28533887)

8

1 reference

ORCID Public Data File 2021

Nidhi Tyagi

object named as

Nidhi Tyagi

5

1 reference

ORCID Public Data File 2021

author name string

Anne-Marie Hansen

1

0 references

Raghothama Chaerkady

2

0 references

Jyoti Sharma

3

0 references

J Javier Díaz-Mejía

4

0 references

Santosh Renuse

6

0 references

Harrys K C Jacob

7

0 references

Nandini A Sahasrabuddhe

9

0 references

Min-Sik Kim

10

0 references

Bernard Delanghe

11

0 references

Narayanaswamy Srinivasan

12

0 references

James B Kaper

14

0 references

Akhilesh Pandey

Creative Commons Attribution 4.0 International

15

0 references

language of work or name

English

0 references

publication date

2013

0 references

published in

PLOS Pathogens

0 references

volume

9

0 references

issue

6

0 references

page(s)

e1003403

0 references

copyright license

start time

13 June 2013

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

describes a project that uses

Cytoscape

object named as

Cytoscape

2 references

Europe PubMed Central

9 June 2022

https://europepmc.org/search?query=(METHODS:'Cytoscape')

inferred from PubMed Central ID database lookup

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

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19 March 2017

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H-NS forms a superhelical protein scaffold for DNA condensation

19 March 2017

1 reference

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Dali server: conservation mapping in 3D

19 March 2017

1 reference

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Structure and heme binding properties ofEscherichia coliO157:H7 ChuX

19 March 2017

1 reference

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Structural Basis for the Regulation Mechanism of the Tyrosine Kinase CapB from Staphylococcus aureus

19 March 2017

1 reference

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Structure of Escherichia coli tyrosine kinase Etk reveals a novel activation mechanism

19 March 2017

1 reference

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Threonine phosphorylation post-translationally regulates protein secretion in Pseudomonas aeruginosa

19 March 2017

1 reference

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Crystal Structures of the Receiver Domain of the Response Regulator PhoP from Escherichia coli in the Absence and Presence of the Phosphoryl Analog Beryllofluoride

19 March 2017

1 reference

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Global, in vivo, and site-specific phosphorylation dynamics in signaling networks

19 March 2017

1 reference

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Bacterial single-stranded DNA-binding proteins are phosphorylated on tyrosine

19 March 2017

1 reference

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The HHpred interactive server for protein homology detection and structure prediction

19 March 2017

1 reference

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Extensive mosaic structure revealed by the complete genome sequence of uropathogenic Escherichia coli.

19 March 2017

1 reference

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WaaP of Pseudomonas aeruginosa is a novel eukaryotic type protein-tyrosine kinase as well as a sugar kinase essential for the biosynthesis of core lipopolysaccharide

19 March 2017

1 reference

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Phenotype microarrays for high-throughput phenotypic testing and assay of gene function

19 March 2017

1 reference

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Genome sequence of enterohaemorrhagic Escherichia coli O157:H7

19 March 2017

1 reference

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One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products

19 March 2017

1 reference

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Diarrheagenic Escherichia coli

19 March 2017

1 reference

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The complete genome sequence of Escherichia coli K-12

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

19 March 2017

1 reference

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Functional overlap in the src gene family: inactivation of hck and fgr impairs natural immunity

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Solution structure of the DNA binding domain of a nucleoid-associated protein, H-NS, from Escherichia coli

19 March 2017

1 reference

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Cytoscape 2.8: new features for data integration and network visualization

19 March 2017

1 reference

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The mechanism of eukaryotic translation initiation and principles of its regulation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Human Protein Reference Database--2009 update

7 April 2017

1 reference

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Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

PhosphoSite: A bioinformatics resource dedicated to physiological protein phosphorylation

7 April 2017

1 reference

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Pathogenic Escherichia coli

7 April 2017

1 reference

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Virulence meets metabolism: Cra and KdpE gene regulation in enterohemorrhagic Escherichia coli

7 April 2017

1 reference

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SspA up-regulates gene expression of the LEE pathogenicity island by decreasing H-NS levels in enterohemorrhagic Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Cross-talk between phosphorylation and lysine acetylation in a genome-reduced bacterium.

29 September 2017

1 reference

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Site-specific analysis of bacterial phosphoproteomes

29 September 2017

1 reference

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Identification of Novel Phosphorylation Motifs Through an Integrative Computational and Experimental Analysis of the Human Phosphoproteome

29 September 2017

1 reference

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Involvement of protein acetylation in glucose-induced transcription of a stress-responsive promoter

29 September 2017

1 reference

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Protein acetylation in prokaryotes

29 September 2017

1 reference

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Interactions and predicted host membrane topology of the enteropathogenic Escherichia coli translocator protein EspB

29 September 2017

1 reference

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Novel members of the Cra regulon involved in carbon metabolism in Escherichia coli

29 September 2017

1 reference

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Histone tyrosine phosphorylation comes of age.

29 September 2017

1 reference

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Cytoskeleton-modulating effectors of enteropathogenic and enterohaemorrhagic Escherichia coli: Tir, EspFU and actin pedestal assembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Extensive phosphorylation with overlapping specificity by Mycobacterium tuberculosis serine/threonine protein kinases

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Comparison of extensive protein fractionation and repetitive LC-MS/MS analyses on depth of analysis for complex proteomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Phosphoproteomics of Klebsiella pneumoniae NTUH-K2044 reveals a tight link between tyrosine phosphorylation and virulence

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

The RNA binding protein CsrA is a pleiotropic regulator of the locus of enterocyte effacement pathogenicity island of enteropathogenic Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Comprehensive analysis of phosphorylated proteins of Escherichia coli ribosomes

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Tyrosine phosphorylation: thirty years and counting

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Signal integration in bacterial two-component regulatory systems.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Identification of the idiosyncratic bacterial protein tyrosine kinase (BY-kinase) family signature

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Immunoaffinity enrichments followed by mass spectrometric detection for studying global protein tyrosine phosphorylation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Transient shielding of intimin and the type III secretion system of enterohemorrhagic and enteropathogenic Escherichia coli by a group 4 capsule

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Multidimensional annotation of the Escherichia coli K-12 genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Enteropathogenic and enterohemorrhagic Escherichia coli virulence gene regulation.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Large-scale phosphorylation analysis of mouse liver

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Oral administration of a Salmonella enterica-based vaccine expressing Bacillus anthracis protective antigen confers protection against aerosolized B. anthracis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Yersinia YopJ acetylates and inhibits kinase activation by blocking phosphorylation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

An iterative statistical approach to the identification of protein phosphorylation motifs from large-scale data sets

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Enteropathogenic and enterohemorrhagic Escherichia coli infections: translocation, translocation, translocation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Endonuclease-mediated mRNA decay requires tyrosine phosphorylation of polysomal ribonuclease 1 (PMR1) for the targeting and degradation of polyribosome-bound substrate mRNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

H-NS: a universal regulator for a dynamic genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Protein phosphorylation on tyrosine in bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Escherichia coli O157:H7 strains that express Shiga toxin (Stx) 2 alone are more neurotropic for gnotobiotic piglets than are isotypes producing only Stx1 or both Stx1 and Stx2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

A novel bacterial tyrosine kinase essential for cell division and differentiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Tyrosine phosphorylation of mammalian RNA polymerase II carboxyl-terminal domain

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Hemorrhagic Colitis Associated with a RareEscherichia coliSerotype

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Actin accumulation at sites of bacterial adhesion to tissue culture cells: basis of a new diagnostic test for enteropathogenic and enterohemorrhagic Escherichia coli

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Post-transcriptional processing of the LEE4 operon in enterohaemorrhagic Escherichia coli.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

A network perspective on the evolution of metabolism by gene duplication.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Structural basis for the function of stringent starvation protein a as a transcription factor.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Protein tyrosine kinases in bacterial pathogens are associated with virulence and production of exopolysaccharide

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

BipA: a tyrosine-phosphorylated GTPase that mediates interactions between enteropathogenic Escherichia coli (EPEC) and epithelial cells

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

A cloned pathogenicity island from enteropathogenic Escherichia coli confers the attaching and effacing phenotype on E. coli K-12.

2 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3681748

Citrobacter rodentium translocated intimin receptor (Tir) is an essential virulence factor needed for actin condensation, intestinal colonization and colonic hyperplasia in mice

2 June 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Phosphoproteome analysis of E. coli reveals evolutionary conservation of bacterial Ser/Thr/Tyr phosphorylation

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

The Ser/Thr/Tyr phosphoproteome of Lactococcus lactis IL1403 reveals multiply phosphorylated proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Conformational stability of the full-atom hexameric model of the ClpB chaperone from Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Phosphoproteomic analysis reveals the multiple roles of phosphorylation in pathogenic bacterium Streptococcus pneumoniae

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Phosphorylation-mediated regulation of heat shock response in Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Hfq affects the expression of the LEE pathogenicity island in enterohaemorrhagic Escherichia coli

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

SspA is required for acid resistance in stationary phase by downregulation of H-NS in Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Tyrosine phosphorylation of protein kinase Wzc from Escherichia coli K12 occurs through a two-step process

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Activation of a prophage-encoded tyrosine kinase by a heterologous infecting phage results in a self-inflicted abortive infection

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PPAT.1003403

Co-ordination of pathogenicity island expression by the BipA GTPase in enteropathogenic Escherichia coli (EPEC)

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23785281

12 December 2020

inferred from PubMed ID database lookup

Tyrosine phosphorylation of DNA binding proteins by multiple cytokines

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/23785281

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1371/JOURNAL.PPAT.1003403

1 reference

release_2wovnnyzjbaurg7wvlcs43pud4

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/2wovnnyzjbaurg7wvlcs43pud4

24 November 2022

mapped directly with Wikidata item

1 reference

1 reference

PubMed publication ID

23785281

1 reference