(Q28598380)

21 June 2017

The environment ontology in 2016: bridging domains with increased scope, semantic density, and interoperation (English)

1 reference

21 June 2017

0 references

0 references

2

0 references

Christopher J. Mungall

6

object named as

Christopher J Mungall

1 reference

21 June 2017

Pier Luigi Buttigieg

1

0 references

Mark P. Schildhauer

object named as

Mark P Schildhauer

4

0 references

Ramona L Walls

5

0 references

Suzanna Lewis

3

object named as

Suzanna E Lewis

1 reference

PubMed ID

27664130

21 June 2017

language of work or name

English

0 references

publication date

23 September 2016

1 reference

Journal of Biomedical Semantics

21 June 2017

1 reference

21 June 2017

7

1 reference

21 June 2017

57

1 reference

21 June 2017

1

1 reference

https://scigraph.springernature.com/pub.10.1186/s13326-016-0097-6

21 June 2017

0 references

cites work

The FAIR Guiding Principles for scientific data management and stewardship

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Emerging semantics to link phenotype and environment

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The ocean sampling day consortium

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Open science resources for the discovery and analysis of Tara Oceans data

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

eNanoMapper: harnessing ontologies to enable data integration for nanomaterial risk assessment

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Piecing together the biogeographic history of Chenopodium vulvaria L. using botanical literature and collections

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The Encyclopedia of Life v2: Providing Global Access to Knowledge About Life on Earth

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Semantics in support of biodiversity knowledge discovery: an introduction to the biological collections ontology and related ontologies

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Home life: factors structuring the bacterial diversity found within and between homes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

A decadal view of biodiversity informatics: challenges and priorities

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Uberon, an integrative multi-species anatomy ontology

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Darwin Core: an evolving community-developed biodiversity data standard

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The Genomic Standards Consortium

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

ISA software suite: supporting standards-compliant experimental annotation and enabling curation at the community level

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The metagenomics RAST server - a public resource for the automatic phylogenetic and functional analysis of metagenomes

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

ChEBI: a database and ontology for chemical entities of biological interest

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

ENVIRONMENTS and EOL: identification of Environment Ontology terms in text and the annotation of the Encyclopedia of Life

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

DISEASES: Text mining and data integration of disease–gene associations

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Value, but high costs in post-deposition data curation

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Microbiota of the indoor environment: a meta-analysis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Comprehensive Meta-analysis of Ontology Annotated 16S rRNA Profiles Identifies Beta Diversity Clusters of Environmental Bacterial Communities.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

TermGenie - a web-application for pattern-based ontology class generation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Bacterial diversity along a 2600 km river continuum

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Automatic concept recognition using the human phenotype ontology reference and test suite corpora

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Mind the gap: house structure and the risk of malaria in Uganda

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Minimum entropy decomposition: unsupervised oligotyping for sensitive partitioning of high-throughput marker gene sequences

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Indoor-air microbiome in an urban subway network: diversity and dynamics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Limits to robustness and reproducibility in the demarcation of operational taxonomic units

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Ecological consistency of SSU rRNA-based operational taxonomic units at a global scale

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Oligotyping: Differentiating between closely related microbial taxa using 16S rRNA gene data.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The environment ontology: contextualising biological and biomedical entities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

PhylomeDB v4: zooming into the plurality of evolutionary histories of a genome

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

MIxS-BE: a MIxS extension defining a minimum information standard for sequence data from the built environment.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Resistance and resilience of the forest soil microbiome to logging-associated compaction

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Clarifying concepts and terms in biodiversity informatics

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Human occupancy as a source of indoor airborne bacteria

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Microbial biogeography of public restroom surfaces

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Malaria in Uganda: challenges to control on the long road to elimination. II. The path forward

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Cross-product extensions of the Gene Ontology

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Effects of air pollution on ecosystems and biological diversity in the eastern United States

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

The airborne metagenome in an indoor urban environment

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

OBO-Edit--an ontology editor for biologists

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Swarm: robust and fast clustering method for amplicon-based studies

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=5035502

Meeting report: advancing practical applications of biodiversity ontologies

3 June 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

Meeting Report: GBIF hackathon-workshop on Darwin Core and sample data (22-24 May 2013)

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

Global Biotic Interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

Critical need for new definitions of “forest” and “forest degradation” in global climate change agreements

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

Putting people in the map: anthropogenic biomes of the world

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

SUSTAINABILITY. Sustainable development agenda: 2030

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

Species Distribution Models: Ecological Explanation and Prediction Across Space and Time

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

FRAM - FRontiers in Arctic marine Monitoring Visions for permanent observations in a gateway to the Arctic Ocean

21 January 2018

1 reference

https://api.crossref.org/works/10.1186%2FS13326-016-0097-6

10.1186/S13326-016-0097-6

21 January 2018

Identifiers

DOI

1 reference

Consolidated OpenCitations Corpus – April 2017

journals/biomedsem/ButtigiegPLSWM16

3365578

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/s13326-016-0097-6

3365578

1 reference

Consolidated OpenCitations Corpus – April 2017

Consolidated OpenCitations Corpus – April 2017

1 reference

1 reference

PubMed ID

27664130