(Q30175235)

English

Transition-state structure as a unifying basis in protein-folding mechanisms: contact order, chain topology, stability, and the extended nucleus mechanism

scientific article

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scholarly article

1 reference

Europe PubMed Central

18 August 2017

Transition-state structure as a unifying basis in protein-folding mechanisms: contact order, chain topology, stability, and the extended nucleus mechanism (English)

1 reference

Europe PubMed Central

18 August 2017

protein folding

0 references

1

object named as

Fersht AR

1 reference

Europe PubMed Central

18 August 2017

language of work or name

0 references

publication date

1 February 2000

1 reference

Europe PubMed Central

18 August 2017

number of pages

5

1 reference

based on heuristic

inferred from page(s)

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

18 August 2017

97

1 reference

Europe PubMed Central

18 August 2017

1525-1529

1 reference

Europe PubMed Central

18 August 2017

4

1 reference

Europe PubMed Central

18 August 2017

First principles prediction of protein folding rates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Experiment and theory highlight role of native state topology in SH3 folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

The folding transition state between SH3 domains is conformationally restricted and evolutionarily conserved.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Mutational analysis of acylphosphatase suggests the importance of topology and contact order in protein folding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Ab initio protein structure prediction of CASP III targets using ROSETTA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

A simple model for calculating the kinetics of protein folding from three-dimensional structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Is protein folding hierarchic? II. Folding intermediates and transition states

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Is protein folding hierarchic? I. Local structure and peptide folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Limited internal friction in the rate-limiting step of a two-state protein folding reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Contact order, transition state placement and the refolding rates of single domain proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Diffusion control in an elementary protein folding reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Nucleation mechanisms in protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

The sixth Datta Lecture. Protein folding and stability: the pathway of folding of barnase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Single versus parallel pathways of protein folding and fractional formation of structure in the transition state

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Structure of the transition state for the folding/unfolding of the barley chymotrypsin inhibitor 2 and its implications for mechanisms of protein folding.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Structure-activity relationships in engineered proteins: analysis of use of binding energy by linear free energy relationships

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Mapping the transition state and pathway of protein folding by protein engineering

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

3 June 2018

Specific nucleus as the transition state for protein folding: evidence from the lattice model.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.4.1525

21 January 2018

Quantitative analysis of structure–activity relationships in engineered proteins by linear free-energy relationships

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.4.1525

21 January 2018

The Structure of the Transition State for Folding of Chymotrypsin Inhibitor 2 Analysed by Protein Engineering Methods: Evidence for a Nucleation-condensation Mechanism for Protein Folding

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.4.1525

21 January 2018

Loop length, intramolecular diffusion and protein folding

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.97.4.1525

21 January 2018

Glutamine, alanine or glycine repeats inserted into the loop of a protein have minimal effects on stability and folding rates

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

26 November 2018

Loop length, intramolecular diffusion and protein folding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=26468

26 November 2018

Finding the right fold

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Analysis of the mechanism of assembly of cleaved barnase from two peptide fragments and its relevance to the folding pathway of uncleaved barnase

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Microsecond protein folding through a compact transition state

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The energy landscape of a fast-folding protein mapped by Ala-->Gly substitutions

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Upper limit of the time scale for diffusion and chain collapse in chymotrypsin inhibitor 2

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Viscosity dependence of the folding kinetics of a dimeric and monomeric coiled coil

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding studies of immunoglobulin-like β-sandwich proteins suggest that they share a common folding pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/10677494

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.97.4.1525

1 reference

Europe PubMed Central

18 August 2017

2000PNAS...97.1525F

0 references

1 reference

Europe PubMed Central

18 August 2017

1 reference

Europe PubMed Central

18 August 2017

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