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Sensitivity and selectivity in protein structure comparison
scientific article
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scholarly article
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stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
title
Sensitivity and selectivity in protein structure comparison
(English)
1 reference
stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
author
William Raymond Pearson
object named as
William R Pearson
series ordinal
2
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Michael Sierk
object named as
Michael L Sierk
series ordinal
1
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language of work or name
English
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publication date
1 March 2004
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Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
published in
Protein Science
1 reference
stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
volume
13
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stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
page(s)
773-785
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stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
issue
3
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Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
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DaliLite workbench for protein structure comparison
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Protein structure comparison using the markov transition model of evolution.
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Comparative protein structure modeling of genes and genomes
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Expectations from structural genomics
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Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods
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Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
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Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships
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3 June 2018
A unified statistical framework for sequence comparison and structure comparison
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3 June 2018
Empirical statistical estimates for sequence similarity searches.
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Touring protein fold space with Dali/FSSP
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3 June 2018
CATH--a hierarchic classification of protein domain structures
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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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3 June 2018
Surprising similarities in structure comparison
1 reference
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PubMed Central
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3 June 2018
Local alignment statistics
1 reference
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PubMed Central
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3 June 2018
Threading a database of protein cores
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PubMed Central
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3 June 2018
Mapping the protein universe
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3 June 2018
SCOP: a structural classification of proteins database for the investigation of sequences and structures
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3 June 2018
Comparison of methods for searching protein sequence databases.
1 reference
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PubMed Central
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3 June 2018
Identification of common molecular subsequences
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PubMed Central
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3 June 2018
Improved tools for biological sequence comparison
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PubMed Central
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3 June 2018
Methods for assessing the statistical significance of molecular sequence features by using general scoring schemes
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3 June 2018
Local protein sequence similarity does not imply a structural relationship
1 reference
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PubMed Central
reference URL
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3 June 2018
Searching protein sequence libraries: Comparison of the sensitivity and selectivity of the Smith-Waterman and FASTA algorithms
1 reference
stated in
PubMed Central
reference URL
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3 June 2018
Maximum-likelihood estimation of the statistical distribution of Smith-Waterman local sequence similarity scores.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Use of receiver operating characteristic (ROC) analysis to evaluate sequence matching.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Protein fold similarity estimated by a probabilistic approach based on C(alpha)-C(alpha) distance comparison.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Completeness in structural genomics.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Structure comparison and structure patterns.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Recognition of analogous and homologous protein folds: analysis of sequence and structure conservation 1 1Edited by F. E. Cohen
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Motif identification neural design for rapid and sensitive protein family search.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2286722
retrieved
26 November 2018
Identifiers
DOI
10.1110/PS.03328504
1 reference
stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
PMCID
2286722
1 reference
stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
PubMed ID
14978311
1 reference
stated in
Europe PubMed Central
PMCID
2286722
retrieved
14 August 2017
ResearchGate publication ID
5467135
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