(Q30319518)

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Metabolome analysis of biosynthetic mutants reveals a diversity of metabolic changes and allows identification of a large number of new compounds in Arabidopsis

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scholarly article

1 reference

Europe PubMed Central

17 June 2017

Metabolome analysis of biosynthetic mutants reveals a diversity of metabolic changes and allows identification of a large number of new compounds in Arabidopsis (English)

1 reference

Europe PubMed Central

17 June 2017

Arabidopsis thaliana

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1 reference

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9-(methylsulfinyl)nonanoic acid

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8-(methylsulfinyl)octylamine

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1 reference

1 reference

1 reference

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L-glutamic acid

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1-cyano-8-(methylsulfinyl)octane

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1-cyano-8-(methylsulfinyl)heptane

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indole-3-carboxaldehyde

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[2-Hydroxy-2-[3-(4-hydroxy-3-methoxyphenyl)prop-2-enoyloxy]ethyl]-trimethylazanium

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Feruloylcholine

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1 reference

1 reference

1 reference

1 reference

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[3,4,5-Trihydroxy-6-(hydroxymethyl)oxan-2-yl] 3-(4-hydroxy-3,5-dimethoxyphenyl)prop-2-enoate

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1-o-Sinapoylglucose

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Constanze Schmotz

4

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Steffen Neumann

5

object named as

Steffen Neumann

1 reference

Europe PubMed Central

17 June 2017

6

object named as

Dierk Scheel

1 reference

Europe PubMed Central

17 June 2017

author name string

Christoph Böttcher

1

1 reference

Europe PubMed Central

17 June 2017

Edda von Roepenack-Lahaye

2

1 reference

Europe PubMed Central

17 June 2017

Jürgen Schmidt

3

1 reference

Europe PubMed Central

17 June 2017

Stephan Clemens

7

1 reference

Europe PubMed Central

17 June 2017

language of work or name

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publication date

13 June 2008

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Europe PubMed Central

17 June 2017

number of pages

14

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based on heuristic

inferred from page(s)

full work available at URL

https://academic.oup.com/plphys/article-pdf/147/4/2107/37094797/plphys_v147_4_2107.pdf

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1104/pp.108.117754?email=unpaywall_01@example.com

Plant Physiology

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Europe PubMed Central

17 June 2017

147

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Europe PubMed Central

17 June 2017

2107-2120

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Europe PubMed Central

17 June 2017

4

1 reference

Europe PubMed Central

17 June 2017

copyright license

Creative Commons Attribution 4.0 International

25 January 2021

1 reference

April 2022 Public Data File from Crossref

copyright status

0 references

online access status

1 reference

19 March 2024

https://api.unpaywall.org/v2/10.1104/pp.108.117754?email=unpaywall_01@example.com

access restriction status

1 reference

based on heuristic

inferred from online access status

Proposed minimum reporting standards for chemical analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Quality control for plant metabolomics: reporting MSI-compliant studies

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Evaluation of glycosylation and malonylation patterns in flavonoid glycosides during LC/MS/MS metabolite profiling.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Evaluation of matrix effects in metabolite profiling based on capillary liquid chromatography electrospray ionization quadrupole time-of-flight mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

The hyper-fluorescent trichome phenotype of the brt1 mutant of Arabidopsis is the result of a defect in a sinapic acid: UDPG glucosyltransferase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Towards the plant metabolome and beyond.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Applications of metabolomics in agriculture

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Nonlinear data alignment for UPLC-MS and HPLC-MS based metabolomics: quantitative analysis of endogenous and exogenous metabolites in human serum

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Metabolomic database annotations via query of elemental compositions: mass accuracy is insufficient even at less than 1 ppm

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Variations on a theme: synthesis and modification of plant benzoic acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

XCMS: processing mass spectrometry data for metabolite profiling using nonlinear peak alignment, matching, and identification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

The path forward for biofuels and biomaterials

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Flavonoid diversity and biosynthesis in seed of Arabidopsis thaliana.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

A coumaroyl-ester-3-hydroxylase insertion mutant reveals the existence of nonredundant meta-hydroxylation pathways and essential roles for phenolic precursors in cell expansion and plant growth.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

The next wave in metabolome analysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Phytochemistry: structure of the blue cornflower pigment

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

The secondary metabolism of Arabidopsis thaliana: growing like a weed

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Matrix effects: the Achilles heel of quantitative high-performance liquid chromatography-electrospray-tandem mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Charge competition and the linear dynamic range of detection in electrospray ionization mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Potential of metabolomics as a functional genomics tool.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

The transparent testa4 mutation prevents flavonoid synthesis and alters auxin transport and the response of Arabidopsis roots to gravity and light

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Molecular regulation of sinapate ester metabolism in Brassica napus: expression of genes, properties of the encoded proteins and correlation of enzyme activities with metabolite accumulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Profiling of Arabidopsis secondary metabolites by capillary liquid chromatography coupled to electrospray ionization quadrupole time-of-flight mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Biochemical characterization of sinapoylglucose:choline sinapoyltransferase, a serine carboxypeptidase-like protein that functions as an acyltransferase in plant secondary metabolism

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Plant metabolomics: large-scale phytochemistry in the functional genomics era.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

The Arabidopsis ref2 mutant is defective in the gene encoding CYP83A1 and shows both phenylpropanoid and glucosinolate phenotypes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Arabidopsis Flavonoid Mutants Are Hypersensitive to UV-B Irradiation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Dietary flavonoids: bioavailability, metabolic effects, and safety

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Metabolomics – the link between genotypes and phenotypes

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The sng2 mutant of Arabidopsis is defective in the gene encoding the serine carboxypeptidase-like protein sinapoylglucose:choline sinapoyltransferase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

An introduction to quadrupole-time-of-flight mass spectrometry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Flavonoid accumulation patterns of transparent testa mutants of arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Flavonoids act as negative regulators of auxin transport in vivo in arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Flavonoid biosynthesis. A colorful model for genetics, biochemistry, cell biology, and biotechnology

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Advances in flavonoid research since 1992.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Identification of glucosyltransferase genes involved in sinapate metabolism and lignin synthesis in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Expression of chalcone synthase and chalcone isomerase proteins in Arabidopsis seedlings

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

A null mutation in the first enzyme of flavonoid biosynthesis does not affect male fertility in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Analysis of Arabidopsis mutants deficient in flavonoid biosynthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Effects of ionizing radiation on a plant genome: analysis of two Arabidopsis transparent testa mutations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2492617

26 November 2018

Related Arabidopsis serine carboxypeptidase-like sinapoylglucose acyltransferases display distinct but overlapping substrate specificities

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolomics: The greatest omics of them all?

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of four Arabidopsis genes encoding hydroxycinnamate glucosyltransferases

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Can Arabidopsis make complex alkaloids?

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Flavonoid accumulation in Arabidopsis repressed in lignin synthesis affects auxin transport and plant growth

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular formula analysis by an MS/MS/MS technique to expedite dereplication of natural products

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Metabolite profiling: from diagnostics to systems biology

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Untargeted large-scale plant metabolomics using liquid chromatography coupled to mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A liquid chromatography-mass spectrometry-based metabolome database for tomato

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sinalbin and other glucosinolates in seeds of double low rape species and Brassica napus cv. Bronowski

1 reference

https://pubmed.ncbi.nlm.nih.gov/18552234

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1104/PP.108.117754

1 reference

Europe PubMed Central

17 June 2017

0 references

1 reference

Europe PubMed Central

17 June 2017

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