(Q30365867)

19 August 2017

Determination and validation of principal gene products. (English)

1 reference

19 August 2017

5

1 reference

19 August 2017

6

Ari Löytynoja

0 references

Jan-Jaap Wesselink

2

Jan-Jaap Wesselink

0 references

Tim Massingham

7

Tim Massingham

0 references

Jennifer Harrow

10

Jennifer Harrow

0 references

Adam Frankish

3

Adam Frankish

1 reference

19 August 2017

1

Michael L Tress

1 reference

19 August 2017

8

Fabio Pardi

1 reference

19 August 2017

Gonzalo López

4

1 reference

19 August 2017

Simon Whelan

9

1 reference

19 August 2017

language of work or name

English

0 references

publication date

15 November 2007

1 reference

19 August 2017

7

1 reference

inferred from page(s)

published in

Bioinformatics

1 reference

19 August 2017

24

1 reference

19 August 2017

11-17

1 reference

19 August 2017

1

1 reference

firestar--prediction of functionally important residues using structural templates and alignment reliability

19 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Three novel ABCC5 splice variants in human retina and their role as regulators of ABCC5 gene expression

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

The implications of alternative splicing in the ENCODE protein complement

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

The (in)dependence of alternative splicing and gene duplication

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

The Universal Protein Resource (UniProt).

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

GENCODE: producing a reference annotation for ENCODE

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Role of human mitochondrial Nfs1 in cytosolic iron-sulfur protein biogenesis and iron regulation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Alternative splicing and RNA selection pressure--evolutionary consequences for eukaryotic genomes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Bioinformatics of alternative splicing and its regulation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Alternative splicing in concert with protein intrinsic disorder enables increased functional diversity in multicellular organisms

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

The finished DNA sequence of human chromosome 12

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

MODBASE: a database of annotated comparative protein structure models and associated resources

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Pfam: clans, web tools and services

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Alternative pre-mRNA splicing in the human system: unexpected role of repetitive sequences as regulatory elements

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Repbase Update, a database of eukaryotic repetitive elements

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

An algorithm for progressive multiple alignment of sequences with insertions

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Is ectopic expression caused by deregulatory mutations or due to gene-regulation leaks with evolutionary potential?

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Comparative gene finding in chicken indicates that we are closing in on the set of multi-exonic widely expressed human genes

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Automated generation of heuristics for biological sequence comparison

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

The ENCODE (ENCyclopedia Of DNA Elements) Project

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Aligning multiple genomic sequences with the threaded blockset aligner

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Only one splice variant of the human TAZ gene encodes a functional protein with a role in cardiolipin metabolism

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Alternative splicing: increasing diversity in the proteomic world

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Alternative pre-mRNA splicing: the logic of combinatorial control

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

3 June 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Ca(2+)-dependent and -independent activities of neural and non-neural synaptotagmins

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2734078

Swiss-Prot: juggling between evolution and stability.

3 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM547

The crystal structure of a human PP2A phosphatase activator reveals a novel fold and highly conserved cleft implicated in protein-protein interactions.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM547

Detecting amino acid sites under positive selection and purifying selection

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM547

SQUARE--determining reliable regions in sequence alignments

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTM547

21 January 2018

The exon theory of genes

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18006548

12 December 2020

inferred from PubMed ID database lookup

Antagonistic effects of an alternative splice variant of human IL-4, IL-4delta2, on IL-4 activities in human monocytes and B cells

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18006548

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/BIOINFORMATICS/BTM547

1 reference

journals/bioinformatics/TressWFLGLMPWHV08

19 August 2017

1 reference

DBLP Dataset 2021-01-02

release_f4qo4nz5ujgfbn5mlhwwpc7bze

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/f4qo4nz5ujgfbn5mlhwwpc7bze

24 November 2022

mapped directly with Wikidata item

1 reference

19 August 2017

1 reference