(Q30369740)

English

Self-consistent residual dipolar coupling based model-free analysis for the robust determination of nanosecond to microsecond protein dynamics.

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scholarly article

1 reference

Europe PubMed Central

23 September 2017

Self-consistent residual dipolar coupling based model-free analysis for the robust determination of nanosecond to microsecond protein dynamics. (English)

1 reference

Europe PubMed Central

23 September 2017

10

1 reference

Europe PubMed Central

21 June 2017

Christian Griesinger

11

0 references

author name string

Nils-Alexander Lakomek

1

1 reference

Europe PubMed Central

23 September 2017

Korvin F A Walter

2

1 reference

Europe PubMed Central

23 September 2017

Christophe Farès

3

1 reference

Europe PubMed Central

23 September 2017

Oliver F Lange

4

1 reference

Europe PubMed Central

23 September 2017

Bert L de Groot

5

1 reference

Europe PubMed Central

23 September 2017

Helmut Grubmüller

6

1 reference

Europe PubMed Central

23 September 2017

Rafael Brüschweiler

7

1 reference

Europe PubMed Central

23 September 2017

Axel Munk

8

1 reference

Europe PubMed Central

23 September 2017

Stefan Becker

9

1 reference

Europe PubMed Central

23 September 2017

language of work or name

1 reference

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publication date

4 June 2008

1 reference

Europe PubMed Central

23 September 2017

Journal of Biomolecular NMR

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Europe PubMed Central

23 September 2017

41

1 reference

Europe PubMed Central

23 September 2017

139-155

1 reference

Europe PubMed Central

23 September 2017

3

1 reference

Europe PubMed Central

23 September 2017

https://scigraph.springernature.com/pub.10.1007/s10858-008-9244-4

0 references

Recognition dynamics up to microseconds revealed from an RDC-derived ubiquitin ensemble in solution

1 reference

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3 June 2018

Simultaneous NMR study of protein structure and dynamics using conservative mutagenesis.

1 reference

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3 June 2018

Microsecond molecular dynamics simulation shows effect of slow loop dynamics on backbone amide order parameters of proteins

1 reference

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3 June 2018

A hierarchy of timescales in protein dynamics is linked to enzyme catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Evidence of molecular alignment fluctuations in aqueous dilute liquid crystalline media

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Simultaneous definition of high resolution protein structure and backbone conformational dynamics using NMR residual dipolar couplings.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Simultaneous determination of protein backbone structure and dynamics from residual dipolar couplings.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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The dynamic energy landscape of dihydrofolate reductase catalysis

1 reference

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3 June 2018

Protein backbone dynamics through 13C'-13Calpha cross-relaxation in NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

NMR residual dipolar couplings as probes of biomolecular dynamics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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Crystal structure of the ubiquitin binding domains of rabex-5 reveals two modes of interaction with ubiquitin

1 reference

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The backrub motion: how protein backbone shrugs when a sidechain dances

1 reference

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Structural basis for ubiquitin recognition and autoubiquitination by Rabex-5.

1 reference

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3 June 2018

Intrinsic dynamics of an enzyme underlies catalysis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Identification of slow correlated motions in proteins using residual dipolar and hydrogen-bond scalar couplings.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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Weak alignment NMR: a hawk-eyed view of biomolecular structure

1 reference

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3 June 2018

Protein backbone dynamics from N-HN dipolar couplings in partially aligned systems: a comparison of motional models in the presence of structural noise

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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Release of long-range tertiary interactions potentiates aggregation of natively unstructured alpha-synuclein

1 reference

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Reinvestigation by phosphorus NMR of lipid distribution in bicelles.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Charged gels as orienting media for measurement of residual dipolar couplings in soluble and integral membrane proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Structure of the ubiquitin hydrolase UCH-L3 complexed with a suicide substrate

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Structural insights into endosomal sorting complex required for transport (ESCRT-I) recognition of ubiquitinated proteins.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

How much backbone motion in ubiquitin is required to account for dipolar coupling data measured in multiple alignment media as assessed by independent cross-validation?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

The role of dynamics in allosteric regulation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

A novel approach to the retrieval of structural and dynamic information from residual dipolar couplings using several oriented media in biomolecular NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Slow dynamics in folded and unfolded states of an SH3 domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Characterization of molecular alignment in aqueous suspensions of Pf1 bacteriophage

1 reference

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3 June 2018

Solution structure and dynamics of a designed hydrophobic core variant of ubiquitin

1 reference

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3 June 2018

Structural basis for the specificity of ubiquitin C-terminal hydrolases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Measurement of J and dipolar couplings from simplified two-dimensional NMR spectra

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Direct measurement of distances and angles in biomolecules by NMR in a dilute liquid crystalline medium

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

NMR evidence for slow collective motions in cyanometmyoglobin

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

Insights into the local residual entropy of proteins provided by NMR relaxation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

MOLMOL: a program for display and analysis of macromolecular structures

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

NMRPipe: a multidimensional spectral processing system based on UNIX pipes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

3 June 2018

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1 reference

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3 June 2018

Nuclear magnetic dipole interactions in field-oriented proteins: information for structure determination in solution

1 reference

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Backbone dynamics of Escherichia coli ribonuclease HI: correlations with structure and function in an active enzyme

1 reference

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1 reference

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1 reference

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1 reference

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1 reference

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

26 November 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

26 November 2018

Enzyme dynamics during catalysis measured by NMR spectroscopy

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

26 November 2018

Elucidation of the protein folding landscape by NMR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

26 November 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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Domain-specific interactions of talin with the membrane-proximal region of the integrin beta3 subunit.

1 reference

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26 November 2018

Principal component method for assessing structural heterogeneity across multiple alignment media.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

26 November 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

26 November 2018

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1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2480484

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1 reference

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1 reference

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26 November 2018

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1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model-Free Approach to the Dynamic Interpretation of Residual Dipolar Couplings in Globular Proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Model-Free Analysis of Protein Backbone Motion from Residual Dipolar Couplings

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evaluation of uncertainty in alignment tensors obtained from dipolar couplings

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Self-Consistency Analysis of Dipolar Couplings in Multiple Alignments of Ubiquitin

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Correlated motions of successive amide N-H bonds in proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

De novo determination of bond orientations and order parameters from residual dipolar couplings with high accuracy

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR characterization of the dynamics of biomacromolecules

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Temperature dependence of protein backbone motion from carbonyl 13C and amide 15N NMR relaxation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Concordance of residual dipolar couplings, backbone order parameters and crystallographic B-factors for a small alpha/beta protein: a unified picture of high probability, fast atomic motions in proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Conformational Flexibility of a Microcrystalline Globular Protein: Order Parameters by Solid-State NMR Spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Quantitative Molecular Ensemble Interpretation of NMR Dipolar Couplings without Restraints

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exploring multiple timescale motions in protein GB3 using accelerated molecular dynamics and NMR spectroscopy

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulating protein alignment in a liquid-crystalline medium through conservative mutagenesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Toward Quantitative Interpretation of Methyl Side-Chain Dynamics from NMR by Molecular Dynamics Simulations

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Validation of Molecular Dynamics Simulations of Biomolecules Using NMR Spin Relaxation as Benchmarks: Application to the AMBER99SB Force Field.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR Relaxation and Internal Dynamics of Ubiquitin from a 0.2 μs MD Simulation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Backbone dynamics of homologous fibronectin type III cell adhesion domains from fibronectin and tenascin

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein dynamics from NMR

1 reference

https://pubmed.ncbi.nlm.nih.gov/18523727

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1007/S10858-008-9244-4

1 reference

Europe PubMed Central

23 September 2017

1 reference

Europe PubMed Central

23 September 2017

1 reference

Europe PubMed Central

23 September 2017

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