Home
Random
Nearby
Log in
Settings
Donate
About Wikidata
Disclaimers
Search
(Q30395997)
Watch
English
Automated minimization of steric clashes in protein structures
scientific article
In more languages
edit
Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
title
Automated minimization of steric clashes in protein structures
(English)
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
main subject
automation
0 references
author
Srinivas Ramachandran
series ordinal
1
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
Feng Ding
series ordinal
3
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
Nikolay V. Dokholyan
series ordinal
4
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
author name string
Pradeep Kota
series ordinal
2
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
language of work or name
English
0 references
publication date
1 January 2011
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
published in
Proteins
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
volume
79
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
page(s)
261-270
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
issue
1
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
cites work
Practically useful: what the Rosetta protein modeling suite can do for you
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Improved prediction of protein side-chain conformations with SCWRL4
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Outcome of a workshop on applications of protein models in biomedical research
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
The SWISS-MODEL Repository and associated resources
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Integration of small-angle X-ray scattering data into structural modeling of proteins and their assemblies
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Ab initio folding of proteins with all-atom discrete molecular dynamics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Protein structure fitting and refinement guided by cryo-EM density
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Fast procedure for reconstruction of full-atom protein models from reduced representations.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Modeling backbone flexibility improves protein stability estimation.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
MolProbity: all-atom contacts and structure validation for proteins and nucleic acids
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Canonical sampling through velocity rescaling
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Emergence of protein fold families through rational design
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
GROMACS: fast, flexible, and free
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
MMTSB Tool Set: enhanced sampling and multiscale modeling methods for applications in structural biology.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Exploring protein native states and large-scale conformational changes with a modified generalized born model
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Design of a Novel Globular Protein Fold with Atomic-Level Accuracy
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
The Protein Data Bank
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Effective energy function for proteins in solution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Discrete molecular dynamics studies of the folding of a protein-like model.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Bayesian statistical analysis of protein side-chain rotamer preferences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Errors in protein structures
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
20 June 2018
Implementation of the CHARMM Force Field in GROMACS: Analysis of Protein Stability Effects from Correction Maps, Virtual Interaction Sites, and Water Models.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3058769
retrieved
26 November 2018
Identifiers
DOI
10.1002/PROT.22879
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
PMCID
3058769
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
PubMed ID
21058396
1 reference
stated in
Europe PubMed Central
PMCID
3058769
retrieved
5 November 2017
ResearchGate publication ID
47702191
0 references
Sitelinks
Wikipedia
(0 entries)
edit
Wikibooks
(0 entries)
edit
Wikinews
(0 entries)
edit
Wikiquote
(0 entries)
edit
Wikisource
(0 entries)
edit
Wikiversity
(0 entries)
edit
Wikivoyage
(0 entries)
edit
Wiktionary
(0 entries)
edit
Multilingual sites
(0 entries)
edit
