(Q30401143)

5 November 2017

A fresh look at the Ramachandran plot and the occurrence of standard structures in proteins (English)

1 reference

ORCID Public Data File 2021

5 November 2017

1 reference

author name string

Scott A Hollingsworth

series ordinal

1

1 reference

5 November 2017

P Andrew Karplus

series ordinal

2

1 reference

5 November 2017

language of work or name

1 reference

1 October 2010

1 reference

5 November 2017

Biomolecular concepts

1 reference

5 November 2017

1

1 reference

5 November 2017

3-4

1 reference

5 November 2017

271-283

1 reference

Protein Geometry Database: a flexible engine to explore backbone conformations and their relationships to covalent geometry.

5 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Conformation dependence of backbone geometry in proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

On the occurrence of linear groups in proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

pi-Turns: types, systematics and the context of their occurrence in protein structures.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

The intrinsic conformational propensities of the 20 naturally occurring amino acids and reflection of these propensities in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Structures, basins, and energies: a deconstruction of the Protein Coil Library.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

3(10)-helices in proteins are parahelices

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Hydrogen Bonded Helical Configurations of the Polypeptide Chain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

PROTEIN FAMILIES AND THEIR EVOLUTION—A STRUCTURAL PERSPECTIVE

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Visualization of conformational distribution of short to medium size segments in globular proteins and identification of local structural motifs.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

MOLPROBITY: structure validation and all-atom contact analysis for nucleic acids and their complexes

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

The pleated sheet, a new layer configuration of polypeptide chains

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

The structure of proteins; two hydrogen-bonded helical configurations of the polypeptide chain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Stereochemistry of polypeptide chain configurations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Structure validation by Calpha geometry: phi,psi and Cbeta deviation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Tripeptide analysis of protein structures

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Is polyproline II a major backbone conformation in unfolded proteins?

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Variants of 3(10)-helices in proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Occurrence, conformational features and amino acid propensities for the pi-helix

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Conformations of amino acids in proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

The pi-helix translates structure into function

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Typical interaction patterns in alphabeta and betaalpha turn motifs

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Patterns, structures, and amino acid frequencies in structural building blocks, a protein secondary structure classification scheme

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Phi/psi-chology: Ramachandran revisited

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Local structural motifs of protein backbones are classified by self-organizing neural networks.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Experimentally observed conformation-dependent geometry and hidden strain in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Automatic classification and analysis of alpha alpha-turn motifs in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Standard structures in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

A revised set of potentials for beta-turn formation in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

How my interest in proteins developed

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Automatic derivation of substructures yields novel structural building blocks in globular proteins.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

The anatomy and taxonomy of protein structure

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Stereochemical criteria for polypeptides and proteins. V. Conformation of a system of three linked peptide units

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

X-ray diffraction studies on polypeptide conformations

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Conformation of Polypeptides and Proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Beta-turns and their distortions: a proposed new nomenclature

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

Automatic definition of recurrent local structure motifs in proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3061398

PROCHECK: a program to check the stereochemical quality of protein structures

20 June 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

An automated classification of the structure of protein loops.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

Prediction of protein backbone conformation based on seven structure assignments. Influence of local interactions

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

Circular dichroism spectrum of peptides in the poly(Pro)II conformation

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

Left-handed polyproline II helices commonly occur in globular proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

The γ Turn, a Possible Folded Conformation of the Polypeptide Chain. Comparison with the β Turn

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

Are proteins made from a limited parts list?

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

New X-Ray Evidence on the Configuration of Polypeptide Chains: Polypeptide Chains in Poly-γ-benzyl-L-glutamate, Keratin and Hæmoglobin

21 January 2018

1 reference

https://api.crossref.org/works/10.1515%2FBMC.2010.022

Novel protein structural motifs containing two-turn and longer 3(10)-helices

21 January 2018

1 reference

12 December 2020

Pauling's Left-Handed α-Helix

1 reference

12 December 2020

Approaching a complete classification of protein secondary structure

1 reference

12 December 2020

IUPAC-IUB Commission on Biochemical Nomenclature. Abbreviations and symbols for the description of the conformation of polypeptide chains. Tentative rules (1969)

1 reference

12 December 2020

The structure of poly-L-proline II

1 reference

12 December 2020

Logical analysis of the mechanism of protein folding. IV. Super-secondary structures

1 reference

12 December 2020

Identifiers

DOI

10.1515/BMC.2010.022

1 reference

release_xoiex74cvndithfgif2y23un7m

5 November 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/xoiex74cvndithfgif2y23un7m

24 November 2022

mapped directly with Wikidata item

1 reference

5 November 2017

PubMed publication ID

21436958

1 reference