(Q30484760)

3 November 2017

Toward an automatic method for extracting cancer- and other disease-related point mutations from the biomedical literature (English)

1 reference

3 November 2017

1 reference

3

Olivier Bodenreider

1 reference

3 November 2017

Emily Doughty

1

1 reference

3 November 2017

Attila Kertesz-Farkas

2

1 reference

3 November 2017

Gary Thompson

4

1 reference

3 November 2017

Asa Adadey

5

1 reference

3 November 2017

Thomas Peterson

6

1 reference

3 November 2017

Maricel G Kann

7

1 reference

3 November 2017

language of work or name

English

0 references

publication date

7 December 2010

1 reference

3 November 2017

1 reference

3 November 2017

27

1 reference

3 November 2017

408-415

1 reference

3 November 2017

3

1 reference

Moara: a Java library for extracting and normalizing gene and protein mentions

3 November 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

EnzyMiner: automatic identification of protein level mutations and their impact on target enzymes from PubMed abstracts

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Pharmspresso: a text mining tool for extraction of pharmacogenomic concepts and relationships from full text

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

High-performance gene name normalization with GeNo

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

McKusick's Online Mendelian Inheritance in Man (OMIM)

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

An upper-level ontology for the biomedical domain

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

BANNER: an executable survey of advances in biomedical named entity recognition.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

The Cancer Biomedical Informatics Grid (caBIG): infrastructure and applications for a worldwide research community.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

MutationFinder: a high-performance system for extracting point mutation mentions from text

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Automatic extraction of protein point mutations using a graph bigram association.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

NCBI reference sequences (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Term identification in the biomedical literature

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Automated extraction of mutation data from the literature: application of MuteXt to G protein-coupled receptors and nuclear hormone receptors

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Exploring semantic groups through visual approaches

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Automatic extraction of mutations from Medline and cross-validation with OMIM.

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

The Unified Medical Language System (UMLS): integrating biomedical terminology

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

The SWISS-PROT protein knowledgebase and its supplement TrEMBL in 2003

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Tagging gene and protein names in biomedical text

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Time for a unified system of mutation description and reporting: a review of locus-specific mutation databases

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Effective mapping of biomedical text to the UMLS Metathesaurus: the MetaMap program

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Insulin-like growth factor (IGF)-binding protein-3 mutants that do not bind IGF-I or IGF-II stimulate apoptosis in human prostate cancer cells

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

dbSNP: the NCBI database of genetic variation

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

Low incidence of androgen receptor gene mutations in human prostatic tumors using single strand conformation polymorphism analysis

20 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3031038

OSIRIS: a tool for retrieving literature about sequence variants.

20 June 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ667

Application of automatic mutation-gene pair extraction to diseases

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ667

Kruppel-like factor 6 germ-line mutations are infrequent in Finnish hereditary prostate cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ667

Polymorphisms of the CYP1B1 gene have higher risk for prostate cancer.

21 January 2018

1 reference

https://api.crossref.org/works/10.1093%2FBIOINFORMATICS%2FBTQ667

Novel tools for extraction and validation of disease-related mutations applied to Fabry disease

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21138947

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Structure-function studies of murine epidermal growth factor: expression and site-directed mutagenesis of epidermal growth factor gene

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21138947

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1093/BIOINFORMATICS/BTQ667

1 reference

journals/bioinformatics/DoughtyKBTAPK11

3 November 2017

1 reference

DBLP Dataset 2021-01-02

28 January 2021

1 reference

3 November 2017

1 reference