(Q31034412)

18 October 2017

How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results (English)

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18 October 2017

3

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28 June 2017

Frank F Millenaar

1

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18 October 2017

John Okyere

2

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18 October 2017

Martijn van Zanten

4

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18 October 2017

Laurentius A C J Voesenek

5

1 reference

18 October 2017

Anton J M Peeters

6

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18 October 2017

15 March 2006

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18 October 2017

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18 October 2017

7

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18 October 2017

137

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https://scigraph.springernature.com/pub.10.1186/1471-2105-7-137

18 October 2017

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Preferred analysis methods for Affymetrix GeneChips revealed by a wholly defined control dataset

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Preprocessing of oligonucleotide array data.

21 June 2018

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Interactively optimizing signal-to-noise ratios in expression profiling: project-specific algorithm selection and detection p-value weighting in Affymetrix microarrays.

21 June 2018

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Guidelines for incorporating non-perfectly matched oligonucleotides into target-specific hybridization probes for a DNA microarray.

21 June 2018

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Exploration, normalization, and summaries of high density oligonucleotide array probe level data

21 June 2018

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A model of molecular interactions on short oligonucleotide microarrays.

21 June 2018

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Absolute mRNA concentrations from sequence-specific calibration of oligonucleotide arrays.

21 June 2018

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Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data

21 June 2018

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Summaries of Affymetrix GeneChip probe level data

21 June 2018

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A comparison of normalization methods for high density oligonucleotide array data based on variance and bias

21 June 2018

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Empirical characterization of the expression ratio noise structure in high-density oligonucleotide arrays.

21 June 2018

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

21 June 2018

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Feature extraction and normalization algorithms for high-density oligonucleotide gene expression array data.

21 June 2018

1 reference

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Match-only integral distribution (MOID) algorithm for high-density oligonucleotide array analysis

21 June 2018

1 reference

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Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application

21 June 2018

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Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

21 June 2018

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High density synthetic oligonucleotide arrays

21 June 2018

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Expression monitoring by hybridization to high-density oligonucleotide arrays

21 June 2018

1 reference

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Large-scale identification, mapping, and genotyping of single-nucleotide polymorphisms in the human genome

21 June 2018

1 reference

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A homolog of the Arabidopsis thaliana ERS gene is actively regulated in Rumex palustris upon flooding.

21 June 2018

1 reference

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CTR1, a negative regulator of the ethylene response pathway in Arabidopsis, encodes a member of the raf family of protein kinases.

21 June 2018

1 reference

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Ethylene-induced differential growth of petioles in Arabidopsis. Analyzing natural variation, response kinetics, and regulation.

21 June 2018

1 reference

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Benchmarking the CATMA microarray. A novel tool for Arabidopsis transcriptome analysis.

25 November 2018

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Real-time RT-PCR profiling of over 1400 Arabidopsis transcription factors: unprecedented sensitivity reveals novel root- and shoot-specific genes.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

A benchmark for Affymetrix GeneChip expression measures.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

Comparative analysis of algorithms for signal quantitation from oligonucleotide microarrays.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

LeCTR1, a tomato CTR1-like gene, demonstrates ethylene signaling ability in Arabidopsis and novel expression patterns in tomato.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

DNA hybridization to mismatched templates: a chip study.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

Growth stage-based phenotypic analysis of Arabidopsis: a model for high throughput functional genomics in plants.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

1-aminocyclopropane-1-carboxylate oxidase activity limits ethylene biosynthesis in Rumex palustris during submergence.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

EIN4 and ERS2 are members of the putative ethylene receptor gene family in Arabidopsis.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

Accessing genetic information with high-density DNA arrays.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

An ethylene-inducible component of signal transduction encoded by never-ripe.

25 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1431565

25 November 2018

Identifiers

DOI

10.1186/1471-2105-7-137

1 reference

Dimensions Publication ID

18 October 2017

0 references

1 reference

18 October 2017

1 reference

ResearchGate publication ID

18 October 2017

7238395

0 references

DBLP publication ID

journals/bmcbi/MillenaarOMZVP06

1 reference

DBLP Dataset 2021-01-02