(Q33318321)

25 July 2017

All and only CpG containing sequences are enriched in promoters abundantly bound by RNA polymerase II in multiple tissues (English)

1 reference

25 July 2017

3

Kimberly Glass

1 reference

25 July 2017

Julian M Rozenberg

1

1 reference

25 July 2017

Andrey Shlyakhtenko

2

1 reference

25 July 2017

Vikas Rishi

4

1 reference

25 July 2017

Maxim V Myakishev

5

1 reference

25 July 2017

Peter C FitzGerald

6

1 reference

25 July 2017

Charles Vinson

7

1 reference

25 July 2017

language of work or name

English

0 references

publication date

5 February 2008

1 reference

25 July 2017

1 reference

25 July 2017

9

1 reference

25 July 2017

67

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-67

25 July 2017

0 references

cites work

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A chromatin landmark and transcription initiation at most promoters in human cells

21 June 2018

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High-resolution profiling of histone methylations in the human genome

21 June 2018

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The epigenomics of cancer

21 June 2018

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The gateway to transcription: identifying, characterizing and understanding promoters in the eukaryotic genome

21 June 2018

1 reference

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Compact, universal DNA microarrays to comprehensively determine transcription-factor binding site specificities

21 June 2018

1 reference

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Comparative genomics of Drosophila and human core promoters

21 June 2018

1 reference

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Transcriptional Regulatory Elements in the Human Genome

21 June 2018

1 reference

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Mice and men: their promoter properties

21 June 2018

1 reference

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Genome-wide analysis of mammalian promoter architecture and evolution

21 June 2018

1 reference

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Genome-wide mapping of DNase hypersensitive sites using massively parallel signature sequencing (MPSS)

21 June 2018

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A high-resolution map of active promoters in the human genome

21 June 2018

1 reference

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Systematic discovery of regulatory motifs in human promoters and 3' UTRs by comparison of several mammals

21 June 2018

1 reference

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Defining the CREB regulon: a genome-wide analysis of transcription factor regulatory regions.

21 June 2018

1 reference

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Clustering of DNA sequences in human promoters

21 June 2018

1 reference

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The histone modification pattern of active genes revealed through genome-wide chromatin analysis of a higher eukaryote

21 June 2018

1 reference

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Genome-wide identification of DNaseI hypersensitive sites using active chromatin sequence libraries

21 June 2018

1 reference

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Statistical analysis of over-represented words in human promoter sequences

21 June 2018

1 reference

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Methylation of adjacent CpG sites affects Sp1/Sp3 binding and activity in the p21(Cip1) promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

The RNA polymerase II core promoter

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Function and regulation of CREB family transcription factors in the nervous system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Identification of unknown target genes of human transcription factors using chromatin immunoprecipitation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

DNA methylation patterns and epigenetic memory

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Transitions in distinct histone H3 methylation patterns at the heterochromatin domain boundaries

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Genome-wide location and function of DNA binding proteins

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Methylation of a CTCF-dependent boundary controls imprinted expression of the Igf2 gene

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Methylation-induced repression--belts, braces, and chromatin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Sp1 binding is inhibited by (m)Cp(m)CpG methylation.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Transcriptional activation by recruitment

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Effects of DNA methylation on DNA-binding proteins and gene expression.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

CpG islands in vertebrate genomes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Cytosine methylation does not affect binding of transcription factor Sp1

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

CpG-rich islands and the function of DNA methylation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Methylation-sensitive sequence-specific DNA binding by the c-Myc basic region

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Analysis of CpG methylation and genomic footprinting at the tyrosine aminotransferase gene: DNA methylation alone is not sufficient to prevent protein binding in vivo

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

CpG methylation inhibits proenkephalin gene expression and binding of the transcription factor AP-2

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Activator protein-1 activity regulates epithelial tumor cell identity.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Profiling DNA methylation patterns using genomic tiling microarrays.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

In vitro methylation of nuclear respiratory factor-1 binding site suppresses the promoter activity of mitochondrial transcription factor A.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

Correlation between histone lysine methylation and developmental changes at the chicken beta-globin locus

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2267717

A fraction of the mouse genome that is derived from islands of nonmethylated, CpG-rich DNA

31 October 2018

1 reference

12 December 2020

Sp1 transcription factor binds DNA and activates transcription even when the binding site is CpG methylated

1 reference

12 December 2020

CpG methylation and the binding of YY1 and ETS proteins to the Surf-1/Surf-2 bidirectional promoter

1 reference

12 December 2020

[1] Isolation and utilization of epidermal keratinocytes for oncogene research

1 reference

12 December 2020

Site-specific DNA methylation in the neurofibromatosis (NF1) promoter interferes with binding of CREB and SP1 transcription factors

1 reference

12 December 2020

Enzymatic synthesis of deoxyribonucleic acid. XI. Further studies on nearest neighbor base sequences in deoxyribonucleic acids

1 reference

12 December 2020

Exploring the characteristics of sequence elements in proximal promoters of human genes

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-9-67

1 reference

Dimensions Publication ID

25 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-67

9 September 2019

1 reference

25 July 2017

1 reference