(Q33497533)

27 July 2017

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Bacterial diversity in aquatic and other environments: what 16S rDNA libraries can tell us. (English)

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27 July 2017

Paul F Kemp

1

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author name string

Josephine Y Aller

series ordinal

2

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27 July 2017

1 February 2004

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27 July 2017

17

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FEMS Microbiology Ecology

inferred from page(s)

published in

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27 July 2017

47

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27 July 2017

161-177

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27 July 2017

2

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Primary, Secondary, and Meta-Analysis of Research

27 July 2017

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Bacterioplankton community composition in a boreal forest lake

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Diversity of free-living prokaryotes from a deep-sea site at the Antarctic Polar Front

21 January 2018

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Evolutionary relationships among ammonia- and nitrite-oxidizing bacteria

21 January 2018

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Microbial diversity in marine sediments from Sagami Bay and Tokyo Bay, Japan, as determined by 16S rRNA gene analysis

21 January 2018

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Divergent members of the bacterial division Verrucomicrobiales in a temperate freshwater lake

21 January 2018

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A few cosmopolitan phylotypes dominate planktonic archaeal assemblages in widely different oceanic provinces

21 January 2018

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7 January 2021

Phylogenetic characterization of the bacterial assemblage associated with mucous secretions of the hydrothermal vent polychaete Paralvinella palmiformis

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7 January 2021

The microbial composition of three limnologically disparate hypersaline Antarctic lakes

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7 January 2021

Phylogenetic composition of bacterioplankton assemblages from the Arctic Ocean

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7 January 2021

Remarkable archaeal diversity detected in a Yellowstone National Park hot spring environment

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7 January 2021

A phylogenetic analysis of microbial communities associated with methane hydrate containing marine fluids and sediments in the Cascadia margin (ODP site 892B).

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7 January 2021

Phylogeny of microorganisms populating a thick, subaerial, predominantly lithotrophic biofilm at an extreme acid mine drainage site

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7 January 2021

Molecular microbial diversity in soils from eastern Amazonia: evidence for unusual microorganisms and microbial population shifts associated with deforestation

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7 January 2021

Bacterial diversity and community composition in the chemocline of the meromictic alpine Lake Cadagno as revealed by 16S rDNA analysis

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7 January 2021

Diversity and community structure within anoxic sediment from marine salinity meromictic lakes and a coastal meromictic marine basin, Vestfold Hilds, Eastern Antarctica.

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7 January 2021

A molecular phylogenetic survey of sea-ice microbial communities (SIMCO).

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7 January 2021

Microbiology of acidic, geothermal springs of Montserrat: environmental rDNA analysis

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7 January 2021

Phylogenetic Diversity of Archaea and Bacteria in a Deep Subsurface Paleosol

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7 January 2021

Increase in bacterial community diversity in subsurface aquifers receiving livestock wastewater input.

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7 January 2021

Prokaryotic diversity in Zostera noltii-colonized marine sediments

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7 January 2021

Archaeaplankton in the Columbia River, its estuary and the adjacent coastal ocean, USA

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7 January 2021

Bacterial primary colonization and early succession on surfaces in marine waters as determined by amplified rRNA gene restriction analysis and sequence analysis of 16S rRNA genes

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7 January 2021

Microbial diversity in hot synthetic compost as revealed by PCR-amplified rRNA sequences from cultivated isolates and extracted DNA.

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7 January 2021

Archaea in coastal marine environments

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7 January 2021

A phylogenetic tree of 16S rRNA sequences from sulfate-reducing bacteria in a sandy marine sediment

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7 January 2021

Levels of bacterial community diversity in four arid soils compared by cultivation and 16S rRNA gene cloning.

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7 January 2021

Partitioning of bacterial communities between seawater and healthy, black band diseased, and dead coral surfaces

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7 January 2021

Microbial microdiversity

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7 January 2021

Genetic diversity of the biofilm covering Montacuta ferruginosa (Mollusca, bivalvia) as evaluated by denaturing gradient gel electrophoresis analysis and cloning of PCR-amplified gene fragments coding for 16S rRNA.

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7 January 2021

Comparative 16S rRNA analysis of lake bacterioplankton reveals globally distributed phylogenetic clusters including an abundant group of actinobacteria

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7 January 2021

Diversity and phylogenetic analysis of bacteria in the mucosa of chicken ceca and comparison with bacteria in the cecal lumen.

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7 January 2021

Bacterial community structure associated with a dimethylsulfoniopropionate-producing North Atlantic algal bloom

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7 January 2021

Phylogenetic analysis of the bacterial communities in marine sediments

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7 January 2021

Species Composition of Cultivated and Noncultivated Bacteria from Short Filaments in an Icelandic Hot Spring at 88 degrees C.

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7 January 2021

Phylogenetic analysis of the succession of bacterial communities in the Great South Bay (Long Island).

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7 January 2021

Bacterioplankton Community Diversity in a Series of Thermally Stratified Lakes

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7 January 2021

Bacterial diversity within the human subgingival crevice

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7 January 2021

Diverse uncultivated bacterial groups from soils of the arid southwestern United States that are present in many geographic regions

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7 January 2021

Bacteria and Archaea physically associated with Gulf of Mexico gas hydrates

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7 January 2021

Culture-independent analysis of gut bacteria: the pig gastrointestinal tract microbiota revisited

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7 January 2021

Geochemistry and microbial diversity of a trichloroethene-contaminated Superfund site undergoing intrinsic in situ reductive dechlorination

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7 January 2021

Phylogenetic diversity of bacterial and archaeal communities in the anoxic zone of the Cariaco Basin.

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7 January 2021

Methanogen and bacterial diversity and distribution in deep gas hydrate sediments from the Cascadia Margin as revealed by 16S rRNA molecular analysis

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7 January 2021

Phylogenetic diversity analysis of subterranean hot springs in Iceland

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7 January 2021

Phylogenetic approaches for describing and comparing the diversity of microbial communities

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7 January 2021

Molecular analysis of bacterial community structure and diversity in unimproved and improved upland grass pastures

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7 January 2021

Estimation of diversity and community structure through restriction fragment length polymorphism distribution analysis of bacterial 16S rRNA genes from a microbial mat at an active, hydrothermal vent system, Loihi Seamount, Hawaii

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7 January 2021

Diversity of deep-sea hydrothermal vent Archaea from Loihi Seamount, Hawaii

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7 January 2021

Combined use of 16S ribosomal DNA and 16S rRNA to study the bacterial community of polychlorinated biphenyl-polluted soil.

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7 January 2021

Soil bacterial community shift correlated with change from forest to pasture vegetation in a tropical soil

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7 January 2021

Culture-dependent and culture-independent characterization of microbial assemblages associated with high-temperature petroleum reservoirs

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7 January 2021

Bacterial diversity in human subgingival plaque

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7 January 2021

Succession of microbial communities during hot composting as detected by PCR-single-strand-conformation polymorphism-based genetic profiles of small-subunit rRNA genes.

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7 January 2021

Diversity and heterogeneity of epibiotic bacterial communities on the marine nematode Eubostrichus dianae

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7 January 2021

Molecular analysis of the microbial diversity present in the colonic wall, colonic lumen, and cecal lumen of a pig.

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7 January 2021

High bacterial diversity in permanently cold marine sediments

1 reference

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7 January 2021

Assessment of changes in microbial community structure during operation of an ammonia biofilter with molecular tools.

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7 January 2021

Analysis of bacterial communities in heavy metal-contaminated soils at different levels of resolution

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7 January 2021

Spatial differences in bacterioplankton composition along the Catalan coast (NW Mediterranean) assessed by molecular fingerprinting.

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7 January 2021

Phylogenetic diversity of mesophilic and thermophilic granular sludges determined by 16S rRNA gene analysis.

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7 January 2021

Bacterial distribution and phylogenetic diversity in the Changjiang estuary before the construction of the Three Gorges Dam.

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7 January 2021

Influence of sulfide and temperature on species composition and community structure of hot spring microbial mats.

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7 January 2021

Diversity and seasonal fluctuations of the dominant members of the bacterial soil community in a wheat field as determined by cultivation and molecular methods

1 reference

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7 January 2021

Kinetic bias in estimates of coastal picoplankton community structure obtained by measurements of small-subunit rRNA gene PCR amplicon length heterogeneity

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7 January 2021

Rumen bacterial diversity as determined by sequence analysis of 16S rDNA libraries

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7 January 2021

Phylogenetic analysis of archaeal 16S rRNA libraries from the rumen suggests the existence of a novel group of archaea not associated with known methanogens

1 reference

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7 January 2021

Phylogenetic characterization of the blue filamentous bacterial community from an Icelandic geothermal spring.

1 reference

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7 January 2021

Biodiversity in deep-sea sites located near the south part of Japan

1 reference

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7 January 2021

Microbial diversity of hydrothermal sediments in the Guaymas Basin: evidence for anaerobic methanotrophic communities

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7 January 2021

Molecular analysis of microbial communities in mobile deltaic muds of Southeastern Papua New Guinea

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7 January 2021

Recovery and phylogenetic analysis of archaeal rRNA sequences from continental shelf sediments

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7 January 2021

Population structure and phylogenetic characterization of marine benthic Archaea in deep-sea sediments

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7 January 2021

Molecular characterization of bacterial populations in petroleum-contaminated groundwater discharged from underground crude oil storage cavities

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7 January 2021

Phylogenetic diversity of bacteria associated with the marine sponge Rhopaloeides odorabile

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7 January 2021

Viruses and Nutrient Cycles in the Sea

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7 January 2021

Bacterial diversity and community structure in an aerated lagoon revealed by ribosomal intergenic spacer analyses and 16S ribosomal DNA sequencing

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7 January 2021

Phylogenetic diversity of a bacterial community determined from Siberian tundra soil DNA.

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7 January 2021

The Relation Between the Number of Species and the Number of Individuals in a Random Sample of an Animal Population

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7 January 2021

Estimating terrestrial biodiversity through extrapolation

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7 January 2021

Counting the uncountable: statistical approaches to estimating microbial diversity

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7 January 2021

Quantifying biodiversity: procedures and pitfalls in the measurement and comparison of species richness

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7 January 2021

Estimating population size via sample coverage for closed capture-recapture models.

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7 January 2021

Estimating the population size for capture-recapture data with unequal catchability

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7 January 2021

Bias caused by template annealing in the amplification of mixtures of 16S rRNA genes by PCR

1 reference

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7 January 2021

Biodiversity, community structural shifts, and biogeography of prokaryotes within Antarctic continental shelf sediment

1 reference

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7 January 2021

Using ecological diversity measures with bacterial communities.

1 reference

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7 January 2021

Estimating prokaryotic diversity and its limits

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7 January 2021

How many species of prokaryotes are there?

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7 January 2021

The Paradox of the Plankton

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7 January 2021

10.1016/S0168-6496(03)00257-5

Identifiers

DOI

1 reference

27 July 2017

1 reference

PubMed ID

19712332