(Q33519472)

27 July 2017

A SNP discovery method to assess variant allele probability from next-generation resequencing data (English)

1 reference

27 July 2017

George M Weinstock

8

0 references

author name string

Yufeng Shen

1

1 reference

27 July 2017

Zhengzheng Wan

2

1 reference

27 July 2017

Cristian Coarfa

3

1 reference

27 July 2017

Rafal Drabek

4

1 reference

27 July 2017

Lei Chen

5

1 reference

27 July 2017

Elizabeth A Ostrowski

6

1 reference

27 July 2017

Yue Liu

7

1 reference

27 July 2017

David A Wheeler

9

1 reference

27 July 2017

Richard A Gibbs

10

1 reference

27 July 2017

Fuli Yu

11

1 reference

27 July 2017

17 December 2009

1 reference

27 July 2017

1 reference

27 July 2017

20

1 reference

27 July 2017

273-280

1 reference

27 July 2017

2

1 reference

VarScan: variant detection in massively parallel sequencing of individual and pooled samples

27 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

SNP detection for massively parallel whole-genome resequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

DNA sequencing of a cytogenetically normal acute myeloid leukaemia genome

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Next-generation DNA sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Sequencing of natural strains of Arabidopsis thaliana with short reads

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Mapping short DNA sequencing reads and calling variants using mapping quality scores

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

High-precision, whole-genome sequencing of laboratory strains facilitates genetic studies

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Substantial biases in ultra-short read data sets from high-throughput DNA sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

The complete genome of an individual by massively parallel DNA sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

The complete genome sequence of Escherichia coli DH10B: insights into the biology of a laboratory workhorse

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Quality scores and SNP detection in sequencing-by-synthesis systems

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Subtle genetic changes enhance virulence of methicillin resistant and sensitive Staphylococcus aureus

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Genome sequencing in microfabricated high-density picolitre reactors

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

BLAT—The BLAST-Like Alignment Tool

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

An SNP map of the human genome generated by reduced representation shotgun sequencing

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Base-calling of automated sequencer traces using phred. II. Error probabilities

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Whole-genome sequencing and variant discovery in C. elegans.

14 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

Pyrobayes: an improved base caller for SNP discovery in pyrosequences.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

A general approach to single-nucleotide polymorphism discovery.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2813483

DNA sequencing. A plan to capture human diversity in 1000 genomes

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20019143

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1101/GR.096388.109

1 reference

27 July 2017

1 reference

27 July 2017

1 reference