(Q33581819)

28 July 2017

Metabolic fluxes during strong carbon catabolite repression by malate in Bacillus subtilis (English)

1 reference

28 July 2017

Bacillus subtilis

1 reference

6

Uwe Sauer

1 reference

28 July 2017

Roelco J Kleijn

1

1 reference

28 July 2017

Joerg M Buescher

2

1 reference

28 July 2017

Ludovic Le Chat

3

1 reference

28 July 2017

Matthieu Jules

4

1 reference

28 July 2017

Stephane Aymerich

5

1 reference

28 July 2017

language of work or name

English

0 references

publication date

16 November 2009

1 reference

Journal of Biological Chemistry

28 July 2017

10

1 reference

based on heuristic

inferred from page(s)

published in

1 reference

28 July 2017

285

1 reference

28 July 2017

1587-1596

1 reference

28 July 2017

3

1 reference

The Bacillus subtilis ywjI (glpX) gene encodes a class II fructose-1,6-bisphosphatase, functionally equivalent to the class III Fbp enzyme

28 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Carbon catabolite control of the metabolic network in Bacillus subtilis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Carbon catabolite repression in Bacillus subtilis: quantitative analysis of repression exerted by different carbon sources

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Carbon catabolite repression in bacteria: many ways to make the most out of nutrients

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Maintenance metabolism and carbon fluxes in Bacillus species

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

anNET: a tool for network-embedded thermodynamic analysis of quantitative metabolome data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Genome-scale reconstruction of metabolic network in Bacillus subtilis based on high-throughput phenotyping and gene essentiality data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

The thermodynamic meaning of metabolic exchange fluxes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Relationship between thermodynamic driving force and one-way fluxes in reversible processes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Metabolic flux analysis of a glycerol-overproducing Saccharomyces cerevisiae strain based on GC-MS, LC-MS and NMR-derived C-labelling data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Transcriptional and metabolic responses of Bacillus subtilis to the availability of organic acids: transcription regulation is important but not sufficient to account for metabolic adaptation

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Metabolic networks in motion: 13C-based flux analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Putative regulatory sites unraveled by network-embedded thermodynamic analysis of metabolome data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

YtsJ has the major physiological role of the four paralogous malic enzyme isoforms in Bacillus subtilis.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

The role of root exudates in rhizosphere interactions with plants and other organisms

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

CcpN (YqzB), a novel regulator for CcpA-independent catabolite repression of Bacillus subtilis gluconeogenic genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Experimental identification and quantification of glucose metabolism in seven bacterial species.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Genetic regulatory mechanisms in the synthesis of proteins

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

21 June 2018

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Metabolic flux profiling of Escherichia coli mutants in central carbon metabolism using GC-MS.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Carbon catabolite repression in bacteria: choice of the carbon source and autoregulatory limitation of sugar utilization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

13C metabolic flux analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Catabolite repression and induction of the Mg(2+)-citrate transporter CitM of Bacillus subtilis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Bacillus subtilis YqkI is a novel malic/Na+-lactate antiporter that enhances growth on malate at low protonmotive force.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Two glyceraldehyde-3-phosphate dehydrogenases with opposite physiological roles in a nonphotosynthetic bacterium

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

The HPr kinase from Bacillus subtilis is a homo-oligomeric enzyme which exhibits strong positive cooperativity for nucleotide and fructose 1,6-bisphosphate binding

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Metabolic flux ratio analysis of genetic and environmental modulations of Escherichia coli central carbon metabolism.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Reduced intracellular ionic strength as the initial trigger for activation of endothelial volume-regulated anion channels

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

The Bacillus subtilis crh gene encodes a HPr-like protein involved in carbon catabolite repression

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Catabolite repression control in the Pseudomonads

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

FACS-optimized mutants of the green fluorescent protein (GFP)

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Alteration of glucose metabolism of Arthrobacter crystallopoietes by compounds which induce sphere to rod morphogenesis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Isolation and characterization of catabolite repression control mutants of Pseudomonas aeruginosa PAO

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Catabolite repression of alpha-amylase gene expression in Bacillus subtilis involves a trans-acting gene product homologous to the Escherichia coli lacl and galR repressors

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Catabolite-repression-like phenomenon in Rhizobium meliloti

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Cyclic adenosine 3',5'-monophosphate levels and activities of adenylate cyclase and cyclic adenosine 3',5'-monophosphate phosphodiesterase in Pseudomonas and Bacteroides

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

The Bacillus subtilis ywkA gene encodes a malic enzyme and its transcription is activated by the YufL/YufM two-component system in response to malate

21 June 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Regulation of the transport system for C4-dicarboxylic acids in Bacillus subtilis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

(13)C-based metabolic flux analysis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Metabolic flux analysis of Escherichia coli K12 grown on 13C-labeled acetate and glucose using GC-MS and powerful flux calculation method

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Metabolic-flux analysis of Saccharomyces cerevisiae CEN.PK113-7D based on mass isotopomer measurements of (13)C-labeled primary metabolites

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Metabolic flux analysis with a comprehensive isotopomer model in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Sampling for metabolome analysis of microorganisms.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

High-throughput quantitative metabolomics: workflow for cultivation, quenching, and analysis of yeast in a multiwell format

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Revisiting the 13C-label distribution of the non-oxidative branch of the pentose phosphate pathway based upon kinetic and genetic evidence

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Large-scale in vivo flux analysis shows rigidity and suboptimal performance of Bacillus subtilis metabolism

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Network identification and flux quantification in the central metabolism of Saccharomyces cerevisiae under different conditions of glucose repression.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Quantitative analysis of metabolic fluxes in Escherichia coli, using two-dimensional NMR spectroscopy and complete isotopomer models.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Bidirectional reaction steps in metabolic networks: IV. Optimal design of isotopomer labeling experiments.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Aluminum-activated citrate and malate transporters from the MATE and ALMT families function independently to confer Arabidopsis aluminum tolerance

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Root-secreted malic acid recruits beneficial soil bacteria

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

A Crh-specific function in carbon catabolite repression in Bacillus subtilis

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Characterization of Bacillus subtilis mutants with carbon source-independent glutamate biosynthesis.

21 January 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

A Novel Method for Continuous Determination of the Intracellular pH in Bacteria with the Internally Conjugated Fluorescent Probe 5 (and 6-)-Carboxyfluorescein Succinimidyl Ester.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Bidirectional reaction steps in metabolic networks: III. Explicit solution and analysis of isotopomer labeling systems.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2804316

Spatio-temporal dynamics of bacterial communities associated with two plant species differing in organic acid secretion: A one-year microcosm study on lupin and wheat

31 October 2018

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M109.061747

Cross-platform comparison of methods for quantitative metabolomics of primary metabolism

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19917605

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1074/JBC.M109.061747

1 reference

28 July 2017

1 reference

28 July 2017

1 reference