(Q33633470)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

An automated stochastic approach to the identification of the protein specificity determinants and functional subfamilies (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

0 references

1

1 reference

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7 February 2020

Mikhail Gelfand

2

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Rob B Russell

6

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Robert B. Russell

7

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Olga V Kalinina

8

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

Aleksandra B Rakhmaninova

7 February 2020

4

object named as

Aleksandra B Rakhmaninova

1 reference

7 February 2020

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

Andrey A Mironov

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

Anatoly R Rubinov

5

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

publication date

15 July 2010

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

Algorithms for Molecular Biology

7 February 2020

published in

1 reference

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7 February 2020

volume

5

1 reference

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7 February 2020

page(s)

29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

https://scigraph.springernature.com/pub.10.1186/1748-7188-5-29

7 February 2020

exact match

0 references

cites work

Combining specificity determining and conserved residues improves functional site prediction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Characterization and prediction of residues determining protein functional specificity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Multi-RELIEF: a method to recognize specificity determining residues from multiple sequence alignments using a Machine-Learning approach for feature weighting

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Determinants of protein function revealed by combinatorial entropy optimization

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Functional specificity lies within the properties and evolutionary changes of amino acids

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Sequence harmony: detecting functional specificity from alignments.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Sequence comparison by sequence harmony identifies subtype-specific functional sites

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Cyclic nucleotide phosphodiesterases: molecular regulation to clinical use

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

TreeDet: a web server to explore sequence space

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Predicting specificity-determining residues in two large eukaryotic transcription factor families

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Structural basis for the activity of drugs that inhibit phosphodiesterases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

A glutamine switch mechanism for nucleotide selectivity by phosphodiesterases

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

A family of evolution-entropy hybrid methods for ranking protein residues by importance.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

DIVERGE: phylogeny-based analysis for functional-structural divergence of a protein family.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Genetic studies of the Lac repressor. XV: 4000 single amino acid substitutions and analysis of the resulting phenotypes on the basis of the protein structure

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

An evolutionary trace method defines binding surfaces common to protein families

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Use of a yeast expression system for the isolation and analysis of drug-resistant mutants of a mammalian phosphodiesterase

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Bayesian search of functionally divergent protein subgroups and their function specific residues.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Prediction of functional specificity determinants from protein sequences using log-likelihood ratios.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Automated selection of positions determining functional specificity of proteins by comparative analysis of orthologous groups in protein families.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Using orthologous and paralogous proteins to identify specificity-determining residues in bacterial transcription factors.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Analysis and prediction of functional sub-types from protein sequence alignments.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Identification of inhibitor specificity determinants in a mammalian phosphodiesterase

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

Phylogenetic inference in protein superfamilies: analysis of SH2 domains.

30 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2914642

[29] Identification of functional residues and secondary structure from protein multiple sequence alignment

30 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20633297

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1748-7188-5-29

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

journals/almob/MazinGMRRRK10

7 February 2020

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

1 reference

https://scigraph.springernature.com/pub.10.1186/1748-7188-5-29

9 September 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20633297%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

1 reference