(Q33818465)

29 July 2017

1 reference

title

Describing sequence-ensemble relationships for intrinsically disordered proteins (English)

1 reference

29 July 2017

Albert H Mao

1

1 reference

29 July 2017

Nicholas Lyle

series ordinal

2

1 reference

29 July 2017

Rohit V Pappu

series ordinal

3

1 reference

29 July 2017

language of work or name

English

0 references

publication date

1 January 2013

1 reference

29 July 2017

1 reference

29 July 2017

449

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29 July 2017

307-318

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29 July 2017

2

1 reference

Tissue-specific splicing of disordered segments that embed binding motifs rewires protein interaction networks

29 July 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Motif switches: decision-making in cell regulation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Residual structures, conformational fluctuations, and electrostatic interactions in the synergistic folding of two intrinsically disordered proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Determination of Conformational Equilibria in Proteins Using Residual Dipolar Couplings

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Ensemble modeling of protein disordered states: experimental restraint contributions and validation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Explaining the structural plasticity of α-synuclein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Fractal dimension of an intrinsically disordered protein: small-angle X-ray scattering and computational study of the bacteriophage λ N protein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsically disordered regions as affinity tuners in protein-DNA interactions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Attributes of short linear motifs.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Towards a robust description of intrinsic protein disorder using nuclear magnetic resonance spectroscopy.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Opposing effects of glutamine and asparagine govern prion formation by intrinsically disordered proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Computational prediction of O-linked glycosylation sites that preferentially map on intrinsically disordered regions of extracellular proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Assessing the contribution of heterogeneous distributions of oligomers to aggregation mechanisms of polyglutamine peptides

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Backbone-driven collapse in unfolded protein chains

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Beyond the random coil: stochastic conformational switching in intrinsically disordered proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Effects of macromolecular crowding on an intrinsically disordered protein characterized by small-angle neutron scattering with contrast matching

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

DNA search efficiency is modulated by charge composition and distribution in the intrinsically disordered tail

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Structural classification of proteins and structural genomics: new insights into protein folding and evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Functions of disordered regions in mammalian early base excision repair proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Tau truncation is a productive posttranslational modification of neurofibrillary degeneration in Alzheimer's disease

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

From the Cover: Charge interactions can dominate the dimensions of intrinsically disordered proteins.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsically disordered proteins are potential drug targets

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

A Combinatorial NMR and EPR Approach for Evaluating the Structural Ensemble of Partially Folded Proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Sequence determinants of compaction in intrinsically disordered proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Net charge per residue modulates conformational ensembles of intrinsically disordered proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Defining conformational ensembles of intrinsically disordered and partially folded proteins directly from chemical shifts.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Determination of the free energy landscape of alpha-synuclein using spin label nuclear magnetic resonance measurements

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Hierarchical structures made of proteins. The complex architecture of spider webs and their constituent silk proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Single-molecule spectroscopy of the temperature-induced collapse of unfolded proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Comparing models of evolution for ordered and disordered proteins.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

A self-consistent description of the conformational behavior of chemically denatured proteins from NMR and small angle scattering.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Quantitative determination of the conformational properties of partially folded and intrinsically disordered proteins using NMR dipolar couplings

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Dynamic interactions of proteins in complex networks: a more structured view.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Examining polyglutamine peptide length: a connection between collapsed conformations and increased aggregation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Thermodynamics of beta-sheet formation in polyglutamine

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Single homopolypeptide chains collapse into mechanically rigid conformations

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsic disorder in proteins associated with neurodegenerative diseases

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

An unusual recent expansion of the C-terminal domain of RNA polymerase II in primate malaria parasites features a motif otherwise found only in mammalian polymerases.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Interplay of alpha-synuclein binding and conformational switching probed by single-molecule fluorescence.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Induced secondary structure and polymorphism in an intrinsically disordered structural linker of the CNS: solid-state NMR and FTIR spectroscopy of myelin basic protein bound to actin.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Tight regulation of unstructured proteins: from transcript synthesis to protein degradation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Malleable machines take shape in eukaryotic transcriptional regulation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Atomistic simulations of the effects of polyglutamine chain length and solvent quality on conformational equilibria and spontaneous homodimerization

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Backbone relaxation coupled to the ionization of internal groups in proteins: a self-guided Langevin dynamics study

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

ABSINTH: a new continuum solvation model for simulations of polypeptides in aqueous solutions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Biophysical characterization of the unstructured cytoplasmic domain of the human neuronal adhesion protein neuroligin 3.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Structure of tumor suppressor p53 and its intrinsically disordered N-terminal transactivation domain.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Small-angle X-ray scattering of reduced ribonuclease A: effects of solution conditions and comparisons with a computational model of unfolded proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Tuning the transport properties of HIV-1 Tat arginine-rich motif in living cells

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Fuzzy complexes: polymorphism and structural disorder in protein-protein interactions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Quantitative characterization of intrinsic disorder in polyglutamine: insights from analysis based on polymer theories

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

From "simple" DNA-protein interactions to the macromolecular machines of gene expression

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Posttranslational modifications and subcellular localization signals: indicators of sequence regions without inherent 3D structure?

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Local structural disorder imparts plasticity on linear motifs.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

A natively unfolded yeast prion monomer adopts an ensemble of collapsed and rapidly fluctuating structures.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Atomic-level characterization of disordered protein ensembles

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Determination of conformationally heterogeneous states of proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

The CATH domain structure database: new protocols and classification levels give a more comprehensive resource for exploring evolution

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Fluorescence correlation spectroscopy shows that monomeric polyglutamine molecules form collapsed structures in aqueous solutions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

End-to-end distance distributions and intrachain diffusion constants in unfolded polypeptide chains indicate intramolecular hydrogen bond formation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Toward an accurate theoretical framework for describing ensembles for proteins under strongly denaturing conditions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsic disorder in transcription factors

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Effects of denaturants on the dynamics of loop formation in polypeptides

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Assessing protein disorder and induced folding

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Statistical coil model of the unfolded state: resolving the reconciliation problem

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Structural insights into a yeast prion illuminate nucleation and strain diversity

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

A molecular dynamics study on universal properties of polymer chains in different solvent qualities. Part I. A review of linear chain properties

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsically unstructured proteins and their functions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Simultaneous determination of protein structure and dynamics.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Reassessing random-coil statistics in unfolded proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Random-coil behavior and the dimensions of chemically unfolded proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Unfolded proteins and protein folding studied by NMR.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Self-assembly of peptides into a beta-barrel motif

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Conformational constraints for amyloid fibrillation: the importance of being unfolded

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

p27 binds cyclin-CDK complexes through a sequential mechanism involving binding-induced protein folding

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

The elongation of yeast prion fibers involves separable steps of association and conversion

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Polymer models of protein stability, folding, and interactions.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Evidence for conformational flexibility in the Tat-TAR recognition motif of cyclin T1.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Binding‐induced folding transitions in calpastatin subdomains A and C

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

ON THE NATURE OF ALLOSTERIC TRANSITIONS: A PLAUSIBLE MODEL

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Amyloid beta -protein (Abeta) assembly: Abeta 40 and Abeta 42 oligomerize through distinct pathways

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Insights into the structure and dynamics of unfolded proteins from nuclear magnetic resonance

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Identification and functions of usefully disordered proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

The behaviour of polyamino acids reveals an inverse side chain effect in amyloid structure formation

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

One fold with many functions: the evolutionary relationships between TIM barrel families based on their sequences, structures and functions

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Homology, pathway distance and chromosomal localization of the small molecule metabolism enzymes in Escherichia coli

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsic disorder and protein function

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Natively unfolded proteins: a point where biology waits for physics

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Coupling of folding and binding for unstructured proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

The CATH protein family database: a resource for structural and functional annotation of genomes

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Predicting properties of intrinsically unstructured proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Propagating conformational changes over long (and short) distances in proteins

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Structure of the YSPTSPS repeat containing two SPXX motifs in the CTD of RNA polymerase II: NMR studies of cyclic model peptides reveal that the SPTS turn is more stable than SPSY in water

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsically disordered protein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Calculation of ensembles of structures representing the unfolded state of an SH3 domain.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Sequence complexity of disordered protein

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Random coil chemical shifts in acidic 8 M urea: implementation of random coil shift data in NMRView

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Why are "natively unfolded" proteins unstructured under physiologic conditions?

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

SCOP: a structural classification of proteins database

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

4 July 2018

The Protein Data Bank

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Intrinsically unstructured proteins: re-assessing the protein structure-function paradigm

4 July 2018

1 reference

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DNA specificity enhanced by sequential binding of protein monomers.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Induced folding in RNA-protein recognition: more than a simple molecular handshake

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Folding-unfolding transitions in single titin molecules characterized with laser tweezers.

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Additivity principles in biochemistry

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Structural studies of p21Waf1/Cip1/Sdi1 in the free and Cdk2-bound state: conformational disorder mediates binding diversity

4 July 2018

1 reference

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VMD: visual molecular dynamics

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Coupling of local folding to site-specific binding of proteins to DNA

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

The Q-linker: a class of interdomain sequences found in bacterial multidomain regulatory proteins.

4 July 2018

1 reference

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The A.T-DNA-binding domain of mammalian high mobility group I chromosomal proteins. A novel peptide motif for recognizing DNA structure

4 July 2018

1 reference

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Interaction of the peptide bond with solvent water: a vapor phase analysis

4 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4074364

Einfluss der Configuration auf die Wirkung der Enzyme

4 July 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

The Key–Lock Theory and the Induced Fit Theory

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Islet amyloid polypeptide: identification of long-range contacts and local order on the fibrillogenesis pathway

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Amyloid fibril formation can proceed from different conformations of a partially unfolded protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Reduced amino acid alphabet is sufficient to accurately recognize intrinsically disordered protein.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

The nanny model for IDPs.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Operational definition of intrinsically unstructured protein sequences based on susceptibility to the 20S proteasome.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Conformational properties of alpha-synuclein in its free and lipid-associated states

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

NMR characterization of long-range order in intrinsically disordered proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Atomistic details of the disordered states of KID and pKID. Implications in coupled binding and folding

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Backbone conformational preferences of an intrinsically disordered protein in solution.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Atomistic simulations reveal structural disorder in the RAP74-FCP1 complex.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Using NMR chemical shifts as structural restraints in molecular dynamics simulations of proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Enhanced conformational space sampling improves the prediction of chemical shifts in proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Effects of Chain Stiffness on the Dynamics of Loop Formation in Polypeptides. Appendix: Testing a 1-Dimensional Diffusion Model for Peptide Dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

The intrinsic stiffness of polyglutamine peptides

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Sequence-dependent correction of random coil NMR chemical shifts

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Reconciling observations of sequence-specific conformational propensities with the generic polymeric behavior of denatured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Scaling behavior and structure of denatured proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Disentangling the coil: modulation of conformational and dynamic properties by site-directed mutation in the non-native state of hen egg white lysozyme

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Role of backbone-solvent interactions in determining conformational equilibria of intrinsically disordered proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Characterizing the conformational ensemble of monomeric polyglutamine.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Energy landscape analyses of disordered histone tails reveal special organization of their conformational dynamics

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Computational study of the fibril organization of polyglutamine repeats reveals a common motif identified in beta-helices

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

More than just tails: intrinsic disorder in histone proteins.

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

NMR analysis of main-chain conformational preferences in an unfolded fibronectin-binding protein

21 January 2018

1 reference

https://api.crossref.org/works/10.1042%2FBJ20121346

Hydrophilicity of polar amino acid side-chains is markedly reduced by flanking peptide bonds

21 January 2018

1 reference

12 December 2020

N-terminal segments modulate the α-helical propensities of the intrinsically disordered basic regions of bZIP proteins

1 reference

12 December 2020

Modulation of an IDP binding mechanism and rates by helix propensity and non-native interactions: association of HIF1α with CBP

1 reference

12 December 2020

Structural biology. Versatility from protein disorder

1 reference

12 December 2020

Computational simulation of the statistical properties of unfolded proteins

1 reference

12 December 2020

Disorder-to-order transition of an intrinsically disordered region of sortase revealed by multiscale enhanced sampling

1 reference

12 December 2020

Synergistic folding of two intrinsically disordered proteins: searching for conformational selection

1 reference

12 December 2020

Unmasking functional motifs within disordered regions of proteins

1 reference

12 December 2020

Micelle-like architecture of the monomer ensemble of Alzheimer's amyloid-β peptide in aqueous solution and its implications for Aβ aggregation

1 reference

12 December 2020

Sliding of p53 along DNA can be modulated by its oligomeric state and by cross-talks between its constituent domains

1 reference

12 December 2020

Folding of the repeat domain of tau upon binding to lipid surfaces

1 reference

12 December 2020

Posttranslational modifications affect the interaction of S100 proteins with tumor suppressor p53

1 reference

12 December 2020

Hydrophobicity of the peptide CO···HN hydrogen-bonded group

1 reference

12 December 2020

Conformations of a polyelectrolyte chain

1 reference

12 December 2020

Identifiers

DOI

10.1042/BJ20121346

1 reference

release_qtvo7jolgfh75gcaxwhvchhzcy

29 July 2017

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/qtvo7jolgfh75gcaxwhvchhzcy

24 November 2022

mapped directly with Wikidata item

PMCID

4074364

1 reference

29 July 2017

1 reference