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Sampling motifs on phylogenetic trees
scientific article
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Statements
instance of
scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
title
Sampling motifs on phylogenetic trees
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
main subject
phylogenetics
1 reference
based on heuristic
inferred from title
author name string
Xiaoman Li
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
Wing H Wong
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
language of work or name
English
0 references
publication date
27 June 2005
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
published in
Proceedings of the National Academy of Sciences of the United States of America
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
volume
102
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
page(s)
9481-9486
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
issue
27
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
describes a project that uses
Bayes' theorem
1 reference
stated in
Europe PubMed Central
retrieved
18 June 2022
reference URL
https://europepmc.org/article/PMC/1160516
based on heuristic
inferred from PubMed Central ID database lookup
maintained by WikiProject
WikiProject Mathematics
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cites work
PhyME: a probabilistic algorithm for finding motifs in sets of orthologous sequences
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Transcriptional regulatory code of a eukaryotic genome
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Eukaryotic regulatory element conservation analysis and identification using comparative genomics
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Motif discovery in heterogeneous sequence data.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Combining phylogenetic data with co-regulated genes to identify regulatory motifs
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Position specific variation in the rate of evolution in transcription factor binding sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
FootPrinter: A program designed for phylogenetic footprinting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Finding Functional Features in Saccharomyces Genomes by Phylogenetic Footprinting
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
TRANSFAC: a database on transcription factors and their DNA binding sites
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
A Hidden Markov Model approach to variation among sites in rate of evolution
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Detecting subtle sequence signals: a Gibbs sampling strategy for multiple alignment
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Fitting a mixture model by expectation maximization to discover motifs in biopolymers
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
28 July 2018
Equation of State Calculations by Fast Computing Machines
1 reference
stated in
Crossref
reference URL
https://api.crossref.org/works/10.1073%2FPNAS.0501620102
retrieved
21 January 2018
Phylogenetic motif detection by expectation-maximization on evolutionary mixtures.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
29 October 2018
BioProspector: discovering conserved DNA motifs in upstream regulatory regions of co-expressed genes.
1 reference
stated in
PubMed Central
reference URL
https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1160516
retrieved
29 October 2018
Finding composite regulatory patterns in DNA sequences
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/15983378
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1073/PNAS.0501620102
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
ADS bibcode
2005PNAS..102.9481L
0 references
PMCID
1160516
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
PubMed ID
15983378
1 reference
stated in
Europe PubMed Central
PubMed ID
15983378
retrieved
29 July 2017
ResearchGate publication ID
7761246
0 references
zbMATH Open document ID
1135.92316
0 references
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