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RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes.
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2836588
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31 December 2019
title
RNA polymerase II pauses and associates with pre-mRNA processing factors at both ends of genes
(English)
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2836588
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31 December 2019
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Kira Glover-Cutter
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1
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2836588
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31 December 2019
David L Bentley
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2836588
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31 December 2019
Joaquín M Espinosa
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Joaquin Espinosa
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2836588
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31 December 2019
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Soojin Kim
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2
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2836588
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31 December 2019
publication date
23 December 2007
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2836588
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31 December 2019
published in
Nature Structural & Molecular Biology
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2836588
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31 December 2019
volume
15
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2836588
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31 December 2019
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71-78
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31 December 2019
issue
1
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2836588
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31 December 2019
exact match
https://scigraph.springernature.com/pub.10.1038/nsmb1352
0 references
cites work
In vivo dynamics of RNA polymerase II transcription.
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PubMed Central
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5 July 2018
The multifunctional protein p54nrb/PSF recruits the exonuclease XRN2 to facilitate pre-mRNA 3' processing and transcription termination
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5 July 2018
The poly(A)-dependent transcriptional pause is mediated by CPSF acting on the body of the polymerase
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5 July 2018
Polyadenylation factor CPSF-73 is the pre-mRNA 3'-end-processing endonuclease
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5 July 2018
Phosphorylation and functions of the RNA polymerase II CTD
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5 July 2018
Breaking barriers to transcription elongation
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5 July 2018
Controlling the elongation phase of transcription with P-TEFb
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5 July 2018
Nucleosome displacement in transcription
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5 July 2018
The conserved AAUAAA hexamer of the poly(A) signal can act alone to trigger a stable decrease in RNA polymerase II transcription velocity
1 reference
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5 July 2018
Genomic localization of RNA binding proteins reveals links between pre-mRNA processing and transcription
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5 July 2018
Terminating the transcript: breaking up is hard to do.
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5 July 2018
Pause sites promote transcriptional termination of mammalian RNA polymerase II
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5 July 2018
Gene-specific requirement for P-TEFb activity and RNA polymerase II phosphorylation within the p53 transcriptional program
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5 July 2018
Ribozyme cleavage reveals connections between mRNA release from the site of transcription and pre-mRNA processing.
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5 July 2018
Integrator, a multiprotein mediator of small nuclear RNA processing, associates with the C-terminal repeat of RNA polymerase II
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5 July 2018
Symplekin and multiple other polyadenylation factors participate in 3'-end maturation of histone mRNAs
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5 July 2018
Cotranscriptional spliceosome assembly dynamics and the role of U1 snRNA:5'ss base pairing in yeast
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Analysis of a noncanonical poly(A) site reveals a tripartite mechanism for vertebrate poly(A) site recognition
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Rules of engagement: co-transcriptional recruitment of pre-mRNA processing factors
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5 July 2018
RNA polymerase II carboxy-terminal domain phosphorylation is required for cotranscriptional pre-mRNA splicing and 3'-end formation
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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5 July 2018
Functional interactions of RNA-capping enzyme with factors that positively and negatively regulate promoter escape by RNA polymerase II
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5 July 2018
RNA polymerase II accumulation in the promoter-proximal region of the dihydrofolate reductase and gamma-actin genes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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5 July 2018
Tat stimulates cotranscriptional capping of HIV mRNA.
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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5 July 2018
An extensive network of coupling among gene expression machines
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5 July 2018
Viral and cellular mRNA capping: past and prospects
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5 July 2018
Different phosphorylated forms of RNA polymerase II and associated mRNA processing factors during transcription
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5 July 2018
Dynamic association of capping enzymes with transcribing RNA polymerase II
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5 July 2018
RNA polymerase II and the integration of nuclear events
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5 July 2018
Transcription elongation factor hSPT5 stimulates mRNA capping
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5 July 2018
Specific transcriptional pausing activates polyadenylation in a coupled in vitro system
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5 July 2018
Formation of mRNA 3' ends in eukaryotes: mechanism, regulation, and interrelationships with other steps in mRNA synthesis
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5 July 2018
EM visualization of transcription by RNA polymerase II: downstream termination requires a poly(A) signal but not transcript cleavage.
1 reference
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PubMed Central
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5 July 2018
Transcriptional termination in the Balbiani ring 1 gene is closely coupled to 3'-end formation and excision of the 3'-terminal intron
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5 July 2018
Origins of mRNA identity: capping enzymes bind to the phosphorylated C-terminal domain of RNA polymerase II
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5 July 2018
Transcription factor TFIID recruits factor CPSF for formation of 3' end of mRNA
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5 July 2018
In vivo transcriptional pausing and cap formation on three Drosophila heat shock genes
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5 July 2018
Promoter-proximal pausing by RNA polymerase II in vitro: transcripts shorter than 20 nucleotides are not capped
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5 July 2018
3' end formation of U1 snRNA precursors is coupled to transcription from snRNA promoters
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PubMed Central
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5 July 2018
Vaccinia virus capping enzyme is a transcription initiation factor
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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5 July 2018
Pcf11 is a termination factor in Drosophila that dismantles the elongation complex by bridging the CTD of RNA polymerase II to the nascent transcript.
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29 October 2018
The RNA tether from the poly(A) signal to the polymerase mediates coupling of transcription to cleavage and polyadenylation
1 reference
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PubMed Central
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29 October 2018
Functional coupling of cleavage and polyadenylation with transcription of mRNA.
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29 October 2018
Coordination of transcription, RNA processing, and surveillance by P-TEFb kinase on heat shock genes
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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29 October 2018
Functional coupling of capping and transcription of mRNA.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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29 October 2018
Functional interaction of yeast pre-mRNA 3' end processing factors with RNA polymerase II.
1 reference
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PubMed Central
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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29 October 2018
Interactions between fission yeast mRNA capping enzymes and elongation factor Spt5.
1 reference
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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2836588
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29 October 2018
Cotranscriptional coupling of splicing factor recruitment and precursor messenger RNA splicing in mammalian cells
1 reference
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Crossref
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https://api.crossref.org/works/10.1038%2FNSMB1352
retrieved
31 March 2020
The polyadenylation factor CPSF-73 is involved in histone-pre-mRNA processing
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1038%2FNSMB1352
retrieved
31 March 2020
Formation of the 3' end of U1 snRNA requires compatible snRNA promoter elements
1 reference
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Crossref
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https://api.crossref.org/works/10.1038%2FNSMB1352
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31 March 2020
Positive patches and negative noodles: linking RNA processing to transcription?
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18157150
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Factor-dependent transcription termination by vaccinia RNA polymerase. Kinetic coupling and requirement for ATP hydrolysis
1 reference
stated in
PubMed
reference URL
https://pubmed.ncbi.nlm.nih.gov/18157150
retrieved
12 December 2020
based on heuristic
inferred from PubMed ID database lookup
Identifiers
DOI
10.1038/NSMB1352
1 reference
stated in
Europe PubMed Central
PMCID
2836588
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18157150%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
PMCID
2836588
1 reference
stated in
Europe PubMed Central
PMCID
2836588
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18157150%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
PubMed ID
18157150
1 reference
stated in
Europe PubMed Central
PMCID
2836588
reference URL
https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18157150%20AND%20SRC:MED&resulttype=core&format=json
retrieved
31 December 2019
ResearchGate publication ID
5692374
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