(Q34076772)

30 July 2017

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title

Towards a covering set of protein family profiles (English)

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30 July 2017

1 reference

1

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30 July 2017

Holm L

2

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30 July 2017

1 January 2000

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Progress in Biophysics and Molecular Biology

30 July 2017

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30 July 2017

73

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30 July 2017

321-337

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30 July 2017

5

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

30 July 2017

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Automated genome sequence analysis and annotation

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

PRINTS-S: the database formerly known as PRINTS.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The Pfam protein families database.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The cytidylyltransferase superfamily: identification of the nucleotide-binding site and fold prediction

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Predicting functions from protein sequences--where are the bottlenecks?

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Approaches to the automatic discovery of patterns in biosequences.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Assessing sequence comparison methods with reliable structurally identified distant evolutionary relationships

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Recent improvements of the ProDom database of protein domain families

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

ProDom and ProDom-CG: tools for protein domain analysis and whole genome comparisons

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Establishing homologies in protein sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The HSSP database of protein structure-sequence alignments and family profiles

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Profile hidden Markov models

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

A comparison of sequence and structure protein domain families as a basis for structural genomics.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Automated protein sequence database classification. II. Delineation Of domain boundaries from sequence similarities

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Homology detection via family pairwise search

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Domain identification by clustering sequence alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Associative database of protein sequences.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Increased coverage of protein families with the blocks database servers

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Selection of representative protein data sets

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The PROSITE database, its status in 1999

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Removing near-neighbour redundancy from large protein sequence collections.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Protein folds and families: sequence and structure alignments

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Finding flexible patterns in unaligned protein sequences

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Hidden Markov models for detecting remote protein homologies

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The SYSTERS protein sequence cluster set.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

A set-theoretic approach to database searching and clustering.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Errors in Genome Reviews

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Structure-based analysis of catalysis and substrate definition in the HIT protein family

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

SCOP: a structural classification of proteins database

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The CATH Database provides insights into protein structure/function relationships.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Sequence comparisons using multiple sequences detect three times as many remote homologues as pairwise methods

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

RSDB: representative protein sequence databases have high information content.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The AAA team: related ATPases with diverse functions

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Dictionary building via unsupervised hierarchical motif discovery in the sequence space of natural proteins.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

MODBASE, a database of annotated comparative protein structure models

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

SMART: a web-based tool for the study of genetically mobile domains

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The HIT protein family: a new family of proteins present in prokaryotes, yeast and mammals

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Modular arrangement of proteins as inferred from analysis of homology.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

The COG database: a tool for genome-scale analysis of protein functions and evolution

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

Fast assignment of protein structures to sequences using the intermediate sequence library PDB-ISL

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

WHAT IF: a molecular modeling and drug design program

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

ProClass Protein Family Database.

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

ProtoMap: automatic classification of protein sequences and hierarchy of protein families

1 reference

https://api.crossref.org/works/10.1016%2FS0079-6107%2800%2900013-4

7 January 2021

10.1016/S0079-6107(00)00013-4

Identifiers

DOI

1 reference

30 July 2017

1 reference

PubMed ID

11063778