(Q34098954)

31 July 2017

title

Comparative genomic and transcriptomic characterization of the toxigenic marine dinoflagellate Alexandrium ostenfeldii (English)

1 reference

31 July 2017

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Alexandrium ostenfeldii

Alexandrium ostenfeldii

1 reference

1 reference

4

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31 July 2017

Ines Yang

2

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Sylke Wohlrab

Sylke Wohlrab

3

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Juergen Kroymann

Juergen Kroymann

5

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Allan D Cembella

Allan Cembella

7

0 references

Uwe John

Uwe John

8

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Heiko Vogel

6

Heiko Vogel

1 reference

31 July 2017

Nina Jaeckisch

1

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31 July 2017

language of work or name

English

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publication date

2 December 2011

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31 July 2017

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31 July 2017

volume

6

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31 July 2017

issue

12

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31 July 2017

page(s)

e28012

1 reference

Creative Commons Attribution 4.0 International

31 July 2017

copyright license

start time

2 December 2011

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

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Comparative gene expression in toxic versus non-toxic strains of the marine dinoflagellate Alexandrium minutum

5 July 2018

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Transcriptome profiling of a toxic dinoflagellate reveals a gene-rich protist and a potential impact on gene expression due to bacterial presence

5 July 2018

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5 July 2018

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Distinct gene number-genome size relationships for eukaryotes and non-eukaryotes: gene content estimation for dinoflagellate genomes

5 July 2018

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Dinoflagellate spliced leader RNA genes display a variety of sequences and genomic arrangements

5 July 2018

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Dinoflagellate mitochondrial genomes: stretching the rules of molecular biology

5 July 2018

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From stop to start: tandem gene arrangement, copy number and trans-splicing sites in the dinoflagellate Amphidinium carterae

5 July 2018

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Preparation and analysis of an expressed sequence tag library from the toxic dinoflagellate Alexandrium catenella

5 July 2018

1 reference

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The remarkable chloroplast genome of dinoflagellates

5 July 2018

1 reference

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The dinoflagellates Durinskia baltica and Kryptoperidinium foliaceum retain functionally overlapping mitochondria from two evolutionarily distinct lineages

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

The highly reduced and fragmented mitochondrial genome of the early-branching dinoflagellate Oxyrrhis marina shares characteristics with both apicomplexan and dinoflagellate mitochondrial genomes

5 July 2018

1 reference

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Spliced leader RNA trans-splicing in dinoflagellates

5 July 2018

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Annotation, submission and screening of repetitive elements in Repbase: RepbaseSubmitter and Censor

5 July 2018

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Genomic overview of mRNA 5'-leader trans-splicing in the ascidian Ciona intestinalis

5 July 2018

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Gene transcription in trypanosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

OrfPredictor: predicting protein-coding regions in EST-derived sequences

5 July 2018

1 reference

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Gene expression in Florida red tide dinoflagellate Karenia brevis: analysis of an expressed sequence tag library and development of DNA microarray

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Insights into a dinoflagellate genome through expressed sequence tag analysis

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Organization of the genome and gene expression in a nuclear environment lacking histones and nucleosomes: the amazing dinoflagellates

5 July 2018

1 reference

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Expressed sequence tag analysis of the dinoflagellate Lingulodinium polyedrum during dark phase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Dinoflagellate expressed sequence tag data indicate massive transfer of chloroplast genes to the nuclear genome

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Histone-like proteins of the dinoflagellate Crypthecodinium cohnii have homologies to bacterial DNA-binding proteins

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

A new class of transcription initiation factors, intermediate between TATA box-binding proteins (TBPs) and TBP-like factors (TLFs), is present in the marine unicellular organism, the dinoflagellate Crypthecodinium cohnii

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Polyadenylated transcripts containing random gene fragments are expressed in dinoflagellate mitochondria

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

The modulation of DNA content: proximate causes and ultimate consequences

5 July 2018

1 reference

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The SWISS-PROT protein sequence data bank and its supplement TrEMBL in 1998.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

RIGS (repeat-induced gene silencing) in Arabidopsis is transcriptional and alters chromatin configuration

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Dosage-dependent modification of position-effect variegation in Drosophila

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Molecular cloning and genomic organization of a gene for luciferin-binding protein from the dinoflagellate Gonyaulax polyedra.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Ordered distribution of modified bases in the DNA of a dinoflagellate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Deoxyribonucleic acid sequence organization in the genome of the dinoflagellate Crypthecodinium cohnii

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

New genetic and physicochemical data on structure of dinoflagellate chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Electron microscopy of liquid crystalline DNA: direct evidence for cholesteric-like organization of DNA in dinoflagellate chromosomes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Towards an understanding of position effect variegation.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Location of B- and Z-DNA in the chromosomes of a primitive eukaryote dinoflagellate

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Slippage synthesis of simple sequence DNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Characterization of the DNA from the dinoflagellate crypthecodinium cohnii and implications for nuclear organization

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Spliced leader RNA-mediated trans-splicing in a dinoflagellate, Karenia brevis

5 July 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Single gene circles in dinoflagellate chloroplast genomes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Nuclear genome sequence survey of the Dinoflagellate Heterocapsa triquetra.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Evidence for multiple independent origins of trans-splicing in Metazoa

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Relationships among stop codon usage bias, its context, isochores, and gene expression level in various eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Repeat-induced gene silencing in mammals.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Evolution of Repeated DNA Sequences by Unequal Crossover

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Evolution of genome size: new approaches to an old problem

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Most mRNAs in the nematode Ascaris lumbricoides are trans-spliced: a role for spliced leader addition in translational efficiency

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3229502

Widespread recycling of processed cDNAs in dinoflagellates

28 October 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Structure of Heterochromatin

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0028012

Isolation of the major basic nuclear protein and its localization on chromosomes of the dinoflagellate, Oxyrrhis marina

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22164224

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Morphology and behaviour of dinoflagellate chromosomes during the cell cycle and mitosis

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/22164224

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0028012

1 reference

31 July 2017

0 references

1 reference

31 July 2017

1 reference