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Computational methods for the prediction of protein interactions
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scholarly article
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
review article
1 reference
stated in
Europe PubMed Central
title
Computational methods for the prediction of protein interactions
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
main subject
computational biology
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based on heuristic
inferred from title
author
Alfonso Valencia
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
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31 July 2017
author name string
Florencio Pazos
series ordinal
2
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
publication date
1 June 2002
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stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
published in
Current Opinion in Structural Biology
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
volume
12
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
page(s)
368-373
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stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
issue
3
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
cites work
A novel genetic system to detect protein-protein interactions
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Functional organization of the yeast proteome by systematic analysis of protein complexes
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Global analysis of protein activities using proteome chips
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7 January 2021
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A combined experimental and computational strategy to define protein interaction networks for peptide recognition modules
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7 January 2021
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Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins
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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae
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The protein-protein interaction map of Helicobacter pylori
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7 January 2021
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Measuring protein-protein interactions.
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7 January 2021
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Protein--protein interaction maps: a lead towards cellular functions
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7 January 2021
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Who's your neighbor? New computational approaches for functional genomics
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7 January 2021
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Predicting protein function by genomic context: quantitative evaluation and qualitative inferences
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7 January 2021
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Assigning protein functions by comparative genome analysis: Protein phylogenetic profiles
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7 January 2021
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Microbial genescapes: phyletic and functional patterns of ORF distribution among prokaryotes.
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Conserved clusters of functionally related genes in two bacterial genomes.
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Conservation of gene order: a fingerprint of proteins that physically interact
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Detecting protein function and protein-protein interactions from genome sequences
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7 January 2021
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Protein interaction maps for complete genomes based on gene fusion events
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7 January 2021
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Prediction of protein interactions: metabolic enzymes are frequently involved in gene fusion
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Correlated sequence-signatures as markers of protein-protein interaction
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The coevolution of gene family trees
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7 January 2021
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Species-specificity of the cohesin-dockerin interaction between Clostridium thermocellum and Clostridium cellulolyticum: prediction of specificity determinants of the dockerin domain
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Co-evolution of proteins with their interaction partners
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Similarity of phylogenetic trees as indicator of protein-protein interaction.
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Correlated mutations and residue contacts in proteins
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7 January 2021
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Improving contact predictions by the combination of correlated mutations and other sources of sequence information
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7 January 2021
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Effective use of sequence correlation and conservation in fold recognition
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7 January 2021
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Correlated mutations contain information about protein-protein interaction
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7 January 2021
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In silico two-hybrid system for the selection of physically interacting protein pairs.
1 reference
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Crossref
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7 January 2021
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DIP, the Database of Interacting Proteins: a research tool for studying cellular networks of protein interactions
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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BIND--The Biomolecular Interaction Network Database
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Prediction of protein-protein interactions by docking methods.
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Crossref
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Analysis of protein-protein interaction sites using surface patches
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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The atomic structure of protein-protein recognition sites
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Prediction of protein interaction sites from sequence profile and residue neighbor list.
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Crossref
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Prediction of protein--protein interaction sites in heterocomplexes with neural networks.
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7 January 2021
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A method to predict functional residues in proteins
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7 January 2021
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An evolutionary trace method defines binding surfaces common to protein families
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7 January 2021
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Classification of protein families and detection of the determinant residues with an improved self-organizing map.
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Evolution of the Rab family of small GTP-binding proteins
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7 January 2021
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A method to predict residues conferring functional differences between related proteins: application to MAP kinase pathways.
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Distinct structural elements of rab5 define its functional specificity.
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Effector recognition by the small GTP-binding proteins Ras and Ral
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Protein interaction maps for model organisms
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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The large-scale organization of metabolic networks
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7 January 2021
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Lethality and centrality in protein networks
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7 January 2021
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Integrated genomic and proteomic analyses of a systematically perturbed metabolic network
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Interrogating protein interaction networks through structural biology
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Evolutionary rate in the protein interaction network
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https://api.crossref.org/works/10.1016%2FS0959-440X%2802%2900333-0
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7 January 2021
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Identifiers
DOI
10.1016/S0959-440X(02)00333-0
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
PubMed ID
12127457
1 reference
stated in
Europe PubMed Central
PubMed ID
12127457
retrieved
31 July 2017
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