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Computational methods for gene annotation: the Arabidopsis genome
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scholarly article
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Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
title
Computational methods for gene annotation: the Arabidopsis genome
(English)
1 reference
stated in
Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
author name string
Cho Y
series ordinal
1
1 reference
stated in
Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
Walbot V
series ordinal
2
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Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
language of work or name
English
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inferred from title
publication date
1 April 2001
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Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
published in
Current Opinion in Biotechnology
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stated in
Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
volume
12
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Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
page(s)
126-130
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Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
issue
2
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Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
cites work
Functional genomics in Arabidopsis: large-scale insertional mutagenesis complements the genome sequencing project
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Gene traps: tools for plant development and genomics
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DAtA: database of Arabidopsis thaliana annotation
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7 January 2021
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Extensive duplication and reshuffling in the Arabidopsis genome.
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The compositional organization and the expression of the Arabidopsis genome
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7 January 2021
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Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana.
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Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana
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Clearing a path through the jungle: progress in Arabidopsis genomics
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7 January 2021
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Progress in Arabidopsis genome sequencing and functional genomics.
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7 January 2021
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Structural analysis of Arabidopsis thaliana chromosome 3. II. Sequence features of the 4,251,695 bp regions covered by 90 P1, TAC and BAC clones
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Structural analysis of Arabidopsis thaliana chromosome 5. IX. Sequence features of the regions of 1,011,550 bp covered by seventeen P1 and TAC clones
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AXR2 encodes a member of the Aux/IAA protein family
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Basic local alignment search tool
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7 January 2021
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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs
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Highly specific protein sequence motifs for genome analysis
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7 January 2021
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IMPALA: matching a protein sequence against a collection of PSI-BLAST-constructed position-specific score matrices
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7 January 2021
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Noncoding RNA genes
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7 January 2021
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Evaluation of gene structure prediction programs.
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7 January 2021
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Gene structure prediction by spliced alignment of genomic DNA with protein sequences: increased accuracy by differential splice site scoring.
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EbEST: an automated tool using expressed sequence tags to delineate gene structure
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Evaluation of gene prediction software using a genomic data set: application to Arabidopsis thaliana sequences
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Crossref
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7 January 2021
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GeneMark.hmm: new solutions for gene finding
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7 January 2021
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Prediction of complete gene structures in human genomic DNA
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7 January 2021
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Automated gene identification in large-scale genomic sequences.
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7 January 2021
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Evidence for an ancient chromosomal duplication in Arabidopsis thaliana by sequencing and analyzing a 400-kb contig at the APETALA2 locus on chromosome 4.
1 reference
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7 January 2021
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ARF1, a transcription factor that binds to auxin response elements
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Errors in genome annotation
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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DNA microarrays for studies of higher plants and other photosynthetic organisms
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7 January 2021
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Chasing the dream: plant EST microarrays
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7 January 2021
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Monitoring genome-wide expression in plants
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Copying out our ABCs: the role of gene redundancy in interpreting genetic hierarchies
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Alternatively spliced mRNA variants of chloroplast ascorbate peroxidase isoenzymes in spinach leaves.
1 reference
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atSRp30, one of two SF2/ASF-like proteins from Arabidopsis thaliana, regulates splicing of specific plant genes
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Light regulates alternative splicing of hydroxypyruvate reductase in pumpkin
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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The Two Forms of Ribulose-1,5-Bisphosphate Carboxylase/Oxygenase Activase Differ in Sensitivity to Elevated Temperature
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7 January 2021
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Genomic approaches to plant disease resistance
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Positional cloning in Arabidopsis. Why it feels good to have a genome initiative working for you.
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Alignment of whole genomes
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Optimal spliced alignment of homologous cDNA to a genomic DNA template
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
based on heuristic
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Homology-based gene structure prediction: simplified matching algorithm using a translated codon (tron) and improved accuracy by allowing for long gaps.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
based on heuristic
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Sequencing solution: use volunteer annotators organized via Internet
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Crossref
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana.
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
based on heuristic
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Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana
1 reference
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Crossref
reference URL
https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
based on heuristic
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Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana.
1 reference
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Crossref
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https://api.crossref.org/works/10.1016%2FS0958-1669%2800%2900185-3
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7 January 2021
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A green chapter in the book of life
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7 January 2021
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Identifiers
DOI
10.1016/S0958-1669(00)00185-3
1 reference
stated in
Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
PubMed ID
11287224
1 reference
stated in
Europe PubMed Central
PubMed ID
11287224
retrieved
31 July 2017
ResearchGate publication ID
222355396
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