(Q34300281)

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Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts.

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24 November 2019

Single-stranded breaks in DNA but not oxidative DNA base damages block transcriptional elongation by RNA polymerase II in HeLa cell nuclear extracts (English)

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Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14978042%20AND%20SRC:MED&resulttype=core&format=json

24 November 2019

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Susan S Wallace

3

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24 November 2019

author name string

Scott D Kathe

1

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24 November 2019

Guang-Ping Shen

2

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24 November 2019

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21 February 2004

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24 November 2019

Journal of Biological Chemistry

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24 November 2019

279

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24 November 2019

18511-18520

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24 November 2019

18

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24 November 2019

Mechanisms of transcription-coupled DNA repair

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Preferential repair of ionizing radiation-induced damage in the transcribed strand of an active human gene is defective in Cockayne syndrome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Defective transcription-coupled repair of oxidative base damage in Cockayne syndrome patients from XP group G

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Transcription-coupled repair of 8-oxoguanine: requirement for XPG, TFIIH, and CSB and implications for Cockayne syndrome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Initiation of base excision repair: glycosylase mechanisms and structures

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Quality control by DNA repair

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Transcriptional mutagenesis induced by uracil and 8-oxoguanine in Escherichia coli.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Repair of 8-oxoG is slower in endogenous nuclear genes than in mitochondrial DNA and is without strand bias.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Repair of oxidative damage in nuclear DNA sequences with different transcriptional activities.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Gene-specific repair of gamma-ray-induced DNA strand breaks in colon cancer cells: no coupling to transcription and no removal from the mitochondrial genome.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Transcription-coupled DNA repair is genomic context-dependent

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Selective removal of transcription-blocking DNA damage from the transcribed strand of the mammalian DHFR gene

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Molecular mechanism of transcription-repair coupling.

1 reference

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21 January 2018

E. coli Transcription repair coupling factor (Mfd protein) rescues arrested complexes by promoting forward translocation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Biological consequences of free radical-damaged DNA bases.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Effects on sister chromatid exchange frequency of aldehyde dehydrogenase 2 genotype and smoking in vinyl chloride workers.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Oxidative DNA lesions as blocks to in vitro transcription by phage T7 RNA polymerase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Effect of thymine glycol on transcription elongation by T7 RNA polymerase and mammalian RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Effects of nonbulky DNA base damages on Escherichia coli RNA polymerase-mediated elongation and promoter clearance.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Effects of endogenous DNA base lesions on transcription elongation by mammalian RNA polymerase II. Implications for transcription-coupled DNA repair and transcriptional mutagenesis.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Effects of abasic sites and DNA single-strand breaks on prokaryotic RNA polymerases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

T7 RNA polymerase bypass of large gaps on the template strand reveals a critical role of the nontemplate strand in elongation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Template strand gap bypass is a general property of prokaryotic RNA polymerases: implications for elongation mechanisms.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The genetic defect in Cockayne syndrome is associated with a defect in repair of UV-induced DNA damage in transcriptionally active DNA.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The Cockayne syndrome B protein, involved in transcription-coupled DNA repair, resides in an RNA polymerase II-containing complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The Cockayne syndrome group A gene encodes a WD repeat protein that interacts with CSB protein and a subunit of RNA polymerase II TFIIH

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Interactions involving the human RNA polymerase II transcription/nucleotide excision repair complex TFIIH, the nucleotide excision repair protein XPG, and Cockayne syndrome group B (CSB) protein

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Transcript cleavage by RNA polymerase II arrested by a cyclobutane pyrimidine dimer in the DNA template

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Escherichia coli endonuclease VIII: cloning, sequencing, and overexpression of the nei structural gene and characterization of nei and nei nth mutants

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The mechanisms of action of E. coli endonuclease III and T4 UV endonuclease (endonuclease V) at AP sites

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The multiple activities of Escherichia coli endonuclease IV and the extreme lability of 5'-terminal base-free deoxyribose 5-phosphates

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Mechanism of DNA strand nicking at apurinic/apyrimidinic sites by Escherichia coli [formamidopyrimidine]DNA glycosylase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

HIV-1 Tat protein increases transcriptional initiation and stabilizes elongation

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The enigma of endonuclease VIII.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Escherichia coli RNA and DNA polymerase bypass of dihydrouracil: mutagenic potential via transcription and replication

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

XRCC1 stimulates human polynucleotide kinase activity at damaged DNA termini and accelerates DNA single-strand break repair

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Induction, repair and biological relevance of radiation-induced DNA lesions in eukaryotic cells

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Transcription elongation factor SII.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Requirement of yeast RAD2, a homolog of human XPG gene, for efficient RNA polymerase II transcription. implications for Cockayne syndrome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

XPG endonuclease makes the 3' incision in human DNA nucleotide excision repair

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Cockayne's Syndrome Fibroblasts Have Increased Sensitivity to Ultraviolet Light But Normal Rates of Unscheduled DNA Synthesis

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Evolution of the SNF2 family of proteins: subfamilies with distinct sequences and functions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

ATP-dependent chromatin remodeling by the Cockayne syndrome B DNA repair-transcription-coupling factor.

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Cockayne syndrome group B protein enhances elongation by RNA polymerase II

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Association of CBP/p300 acetylase and thymine DNA glycosylase links DNA repair and transcription

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The CBP co-activator is a histone acetyltransferase

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

The transcriptional coactivators p300 and CBP are histone acetyltransferases

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Accessing DNA damage in chromatin: insights from transcription

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Repair of Oxidized Bases in DNA Bubble Structures by Human DNA Glycosylases NEIL1 and NEIL2

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Effects of beta-carotene and alpha-tocopherol on photogenotoxicity induced by 8-methoxypsoralen: the role of oxygen.

1 reference

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21 January 2018

Repair of radiation-induced DNA strand breaks does not occur preferentially in transcriptionally active DNA

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Mutagenicity and repair of oxidative DNA damage: insights from studies using defined lesions

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Transcription bypass or blockage at single-strand breaks on the DNA template strand: effect of different 3' and 5' flanking groups on the T7 RNA polymerase elongation complex

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Mutagenicity of 2-(2',4'-diaminophenoxy)ethanol in Drosophila melanogaster

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Genetic complementation groups in cockayne syndrome

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M313598200

21 January 2018

Identifiers

10.1074/JBC.M313598200

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14978042%20AND%20SRC:MED&resulttype=core&format=json

24 November 2019

1 reference

Europe PubMed Central

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:14978042%20AND%20SRC:MED&resulttype=core&format=json

24 November 2019

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