(Q34346696)

1 August 2017

SNP array profiling of mouse cell lines identifies their strains of origin and reveals cross-contamination and widespread aneuploidy (English)

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1 August 2017

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cell line contamination

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John P Didion

1

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David W. Threadgill

object stated as

David W Threadgill

4

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Herbert C. Morse

object stated as

Herbert C Morse

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author name string

Ryan J Buus

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1 August 2017

Zohreh Naghashfar

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1 August 2017

Fernando Pardo-Manuel de Villena

6

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1 August 2017

language of work or name

English

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publication date

3 October 2014

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1 August 2017

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1 August 2017

15

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1 August 2017

847

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describes a project that uses

1 August 2017

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Ehrlich-Lettre ascites strain E

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The Collaborative Cross as a resource for modeling human disease: CC011/Unc, a new mouse model for spontaneous colitis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Systematic biases in DNA copy number originate from isolation procedures

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Mouse cell line authentication

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

The case for genetic monitoring of mice and rats used in biomedical research

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Deconstructing Mus gemischus: advances in understanding ancestry, structure, and variation in the genome of the laboratory mouse

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

The genome architecture of the Collaborative Cross mouse genetic reference population

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

A Bayesian antedependence model for whole genome prediction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Normal human pluripotent stem cell lines exhibit pervasive mosaic aneuploidy

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Mus lepidoides (Muridae, Rodentia) of central Burma is a distinct species of potentially great evolutionary and biogeographic significance

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Check your cultures! A list of cross-contaminated or misidentified cell lines

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Integrated study of copy number states and genotype calls using high-density SNP arrays.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Chromosome number variation in three mouse embryonic stem cell lines during culture.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Normalization of Illumina Infinium whole-genome SNP data improves copy number estimates and allelic intensity ratios

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Adjustment of genomic waves in signal intensities from whole-genome SNP genotyping platforms

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

SNP panel identification assay (SPIA): a genetic-based assay for the identification of cell lines

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

PennCNV: an integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Application of genome-wide single nucleotide polymorphism typing: simple association and beyond

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

High-resolution genomic profiling of chromosomal aberrations using Infinium whole-genome genotyping

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Current status of chromosomal abnormalities in mouse embryonic stem cell lines used in Japan.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Developing a SNP panel for forensic identification of individuals

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

The consequences of chromosomal aneuploidy on gene expression profiles in a cell line model for prostate carcinogenesis.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

Short tandem repeat profiling provides an international reference standard for human cell lines

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

SNPs for a universal individual identification panel.

6 July 2018

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-15-847

Cell-line authentication: End the scandal of false cell lines.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4198738

27 October 2018

1 reference

12 December 2020

Development of a SNP genotyping panel for genetic monitoring of the laboratory mouse

1 reference

PubMed

12 December 2020

Induced G1 phase arrest of fast-dividing cells improves the quality of genomic profiles generated by array-CGH

1 reference

PubMed

12 December 2020

Cell line misidentification: the beginning of the end

1 reference

PubMed

12 December 2020

Identifiers

DOI

10.1186/1471-2164-15-847

1 reference

1 August 2017

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1 August 2017

1 reference