(Q34362441)

English

An unusual structure formed by antisense-target RNA binding involves an extended kissing complex with a four-way junction and a side-by-side helical alignment

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scholarly article

1 reference

Europe PubMed Central

1 August 2017

An unusual structure formed by antisense-target RNA binding involves an extended kissing complex with a four-way junction and a side-by-side helical alignment (English)

1 reference

Europe PubMed Central

1 August 2017

author name string

Kolb FA

1

1 reference

Europe PubMed Central

1 August 2017

Malmgren C

2

1 reference

Europe PubMed Central

1 August 2017

Westhof E

3

1 reference

Europe PubMed Central

1 August 2017

Ehresmann C

4

1 reference

Europe PubMed Central

1 August 2017

Ehresmann B

5

1 reference

Europe PubMed Central

1 August 2017

Wagner EG

6

1 reference

Europe PubMed Central

1 August 2017

Romby P

7

1 reference

Europe PubMed Central

1 August 2017

language of work or name

0 references

publication date

1 March 2000

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

6

1 reference

Europe PubMed Central

1 August 2017

311-324

1 reference

Europe PubMed Central

1 August 2017

3

1 reference

Europe PubMed Central

1 August 2017

MANIP: an interactive tool for modelling RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Crystal structure of an 82-nucleotide RNA-DNA complex formed by the 10-23 DNA enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

The solution structure of an RNA loop-loop complex: the ColE1 inverted loop sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

An RNA pseudoknot as the molecular switch for translation of the repZ gene encoding the replication initiator of IncIalpha plasmid ColIb-P9.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Ribosomal protein S15 from Thermus thermophilus--cloning, sequencing, overexpression of the gene and RNA-binding properties of the protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Antisense RNA control of plasmid R1 replication. The dominant product of the antisense rna-mrna binding is not a full RNA duplex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

An antisense/target RNA duplex or a strong intramolecular RNA structure 5' of a translation initiation signal blocks ribosome binding: the case of plasmid R1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Crystal structure of a group I ribozyme domain: principles of RNA packing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Mechanism of post-segregational killing: Sok antisense RNA interacts with Hok mRNA via its 5'-end single-stranded leader and competes with the 3'-end of Hok mRNA for binding to the mok translational initiation region

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Antisense RNA control in bacteria, phages, and plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Mutations affecting pseudoknot control of the replication of B group plasmids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Bent helix formation between RNA hairpins with complementary loops

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Bulged-out nucleotides protect an antisense RNA from RNase III cleavage

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

DRAWNA: a program for drawing schematic views of nucleic acids

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Mechanism of binding of the antisense and target RNAs involved in the regulation of IncB plasmid replication

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Chemical probes for higher-order structure in RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Computer modeling from solution data of spinach chloroplast and of Xenopus laevis somatic and oocyte 5 S rRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Defining the inside and outside of a catalytic RNA molecule

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Insertion sequence IS10 anti-sense pairing initiates by an interaction between the 5' end of the target RNA and a loop in the anti-sense RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Secondary structure analysis of the RepA mRNA leader transcript involved in control of replication of plasmid R1.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Control of replication of plasmid R1: kinetics of in vitro interaction between the antisense RNA, CopA, and its target, CopT.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Probing the structure of RNAs in solution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Solution structure of human U1 snRNA. Derivation of a possible three-dimensional model

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Control of replication of plasmid R1: formation of an initial transient complex is rate-limiting for antisense RNA-target RNA pairing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Control of replication of plasmid R1: structures and sequences of the antisense RNA, CopA, required for its binding to the target RNA, CopT.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Control of replication of plasmid R1: the duplex between the antisense RNA, CopA, and its target, CopT, is processed specifically in vivo and in vitro by RNase III

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Replication control of plasmid R1: RepA synthesis is regulated by CopA RNA through inhibition of leader peptide translation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Replication control in plasmid R1: duplex formation between the antisense RNA, CopA, and its target, CopT, is not required for inhibition of RepA synthesis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

The effect of loop size in antisense and target RNAs on the efficiency of antisense RNA control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

3'-terminal labelling of RNA with T4 RNA ligase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Mapping adenines, guanines, and pyrimidines in RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1369915

6 July 2018

Kissing and RNA stability in antisense control of plasmid replication

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Complexes formed by complementary RNA stem-loops. Their formations, structures and interaction with ColE1 Rom protein

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Control of ColE1 plasmid replication. Interaction of Rom protein with an unstable complex formed by RNA I and RNA II

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A highly sensitive probe for guanine N7 in folded structures of RNA: application to tRNAPhe and Tetrahymena group I intron

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Major groove accessibility of RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Replication control of plasmid R1: disruption of an inhibitory RNA structure that sequesters the repA ribosome-binding site permits tap-independent RepA synthesis

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effects of calcium blockers on the cytosolic calcium, H2O2 production and elastase release in human neutrophils

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Inter-domain cross-linking and molecular modelling of the hairpin ribozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of plasmid R1 replication: PcnB and RNase E expedite the decay of the antisense RNA, CopA

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural basis for binding of the plasmid ColIb-P9 antisense Inc RNA to its target RNA with the 5'-rUUGGCG-3' motif in the loop sequence

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structure and activity of the hairpin ribozyme in its natural junction conformation: effect of metal ions

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exploration of metal ion binding sites in RNA folds by Brownian-dynamics simulations

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Folding of the four-way RNA junction of the hairpin ribozyme

1 reference

https://pubmed.ncbi.nlm.nih.gov/10744017

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1017/S135583820099215X

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

1 reference

Europe PubMed Central

1 August 2017

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