(Q34432299)

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Comparison of transcriptome technologies in the pathogenic fungus Aspergillus fumigatus reveals novel insights into the genome and MpkA dependent gene expression

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scholarly article

1 reference

Europe PubMed Central

2 August 2017

Comparison of transcriptome technologies in the pathogenic fungus Aspergillus fumigatus reveals novel insights into the genome and MpkA dependent gene expression (English)

1 reference

Europe PubMed Central

2 August 2017

Aspergillus fumigatus

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Ortholog of A. nidulans FGSC A4 : AN0391, AN7222, A. fumigatus Af293 : Afu2g01760, A. niger CBS 513.88 : An03g06670, An15g07300 and A. oryzae RIB40 : AO090010000045/aoiD, AO090102000259

1 reference

5 February 2019

RNA polymerase I

1 reference

5 February 2019

Putative aspartate aminotransferase

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5 February 2019

Putative translation elongation factor EF-Tu

1 reference

5 February 2019

Putative glycogen phosphorylase

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5 February 2019

nonribosomal peptide synthetase 4

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6 February 2019

Immunoreactive protein

1 reference

6 February 2019

mitogen-activated protein kinase

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6 February 2019

Has domain(s) with predicted catalytic activity and role in metabolic process

1 reference

6 February 2019

nonribosomal peptide synthetase 11

1 reference

6 February 2019

non-reducing polyketide synthase pyr2

1 reference

6 February 2019

nonribosomal peptide synthetase 13

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6 February 2019

fumagillin biosynthesis polyketide synthase

1 reference

6 February 2019

stereoselective keto-reductase

1 reference

6 February 2019

Protein similar to nonribosomal peptide synthases (NRPS-like), encoded in a predicted secondary metabolite gene cluster

1 reference

6 February 2019

Putative fumarate reductase

1 reference

6 February 2019

object named as

Marco Groth

3

0 references

object named as

Olaf Kniemeyer

5

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Reinhard Guthke

4

object named as

Reinhard Guthke

1 reference

Europe PubMed Central

2 August 2017

Axel A Brakhage

6

object named as

Axel A Brakhage

1 reference

Europe PubMed Central

2 August 2017

author name string

Sebastian Müller

1

1 reference

Europe PubMed Central

2 August 2017

Clara Baldin

2

1 reference

Europe PubMed Central

2 August 2017

Vito Valiante

7

1 reference

Europe PubMed Central

2 August 2017

language of work or name

0 references

publication date

2 October 2012

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

13

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Europe PubMed Central

2 August 2017

519

1 reference

Europe PubMed Central

2 August 2017

Systems biology of fungal infection.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Advances in Aspergillus secondary metabolite research in the post-genomic era

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

CADRE: the Central Aspergillus Data REpository 2012

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

The Aspergillus Genome Database (AspGD): recent developments in comprehensive multispecies curation, comparative genomics and community resources

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

The MAP kinase MpkA controls cell wall integrity, oxidative stress response, gliotoxin production and iron adaptation in Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Global transcriptome changes underlying colony growth in the opportunistic human pathogen Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Comparative analysis of proteome and transcriptome variation in mouse

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Analysis of the Aspergillus fumigatus proteome reveals metabolic changes and the activation of the pseurotin A biosynthesis gene cluster in response to hypoxia

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

baySeq: empirical Bayesian methods for identifying differential expression in sequence count data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Power of deep sequencing and agilent microarray for gene expression profiling study

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Heptahelical receptors GprC and GprD of Aspergillus fumigatus Are essential regulators of colony growth, hyphal morphogenesis, and virulence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Survey of the transcriptome of Aspergillus oryzae via massively parallel mRNA sequencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Integrative analysis of the heat shock response in Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Pathogenesis of Aspergillus fumigatus in Invasive Aspergillosis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

TopHat: discovering splice junctions with RNA-Seq

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Two-dimensional proteome reference maps for the human pathogenic filamentous fungus Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

RNA-Seq: a revolutionary tool for transcriptomics

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Accurate whole human genome sequencing using reversible terminator chemistry

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Comparative proteome, transcriptome, and genome analysis of a gonadal and an extragonadal germ cell tumor cell line

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

RNA-seq: an assessment of technical reproducibility and comparison with gene expression arrays

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Mapping and quantifying mammalian transcriptomes by RNA-Seq

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Genomic islands in the pathogenic filamentous fungus Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Genetic basis of proteome variation in yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

AUGUSTUS: ab initio prediction of alternative transcripts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

The akuB(KU80) mutant deficient for nonhomologous end joining is a powerful tool for analyzing pathogenicity in Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Systemic Fungal Infections Caused by Aspergillus Species: Epidemiology, Infection Process and Virulence Determinants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3505472

6 July 2018

The mitogen-activated protein kinase MpkA of Aspergillus fumigatus regulates cell wall signaling and oxidative stress response

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-519

21 January 2018

The MpkA MAP kinase module regulates cell wall integrity signaling and pyomelanin formation in Aspergillus fumigatus.

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-519

21 January 2018

Transannular disulfide formation in gliotoxin biosynthesis and its role in self-resistance of the human pathogen Aspergillus fumigatus

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-519

21 January 2018

Functional genomic profiling of Aspergillus fumigatus biofilm reveals enhanced production of the mycotoxin gliotoxin

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-519

21 January 2018

Genome-wide maps of mono- and di-nucleosomes of Aspergillus fumigatus

1 reference

https://api.crossref.org/works/10.1186%2F1471-2164-13-519

21 January 2018

FungiFun: a web-based application for functional categorization of fungal genes and proteins

1 reference

https://pubmed.ncbi.nlm.nih.gov/23031507

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1186/1471-2164-13-519

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

1 reference

Europe PubMed Central

2 August 2017

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